(2S,4R)-N-((S)-2-(tert-Butyl)-17-((S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)-4,16-dioxo-6,9,12-trioxa-3,15-diazaheptadecan-1-oyl)-4-hydroxy-1-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide

 CAS No.: 1797406-69-9  Cat No.: BP-400004  Purity: 98% 4.5  

This compound is commonly identified as MZ1, a cell-penetrant BET-family PROTAC based on a JQ1-derived bromodomain ligand conjugated to a von Hippel-Lindau ligand. The target-binding element engages BET bromodomains, with a strong functional preference for BRD4 degradation over BRD2 and BRD3, while the hydroxyproline-containing VHL ligand recruits the VHL E3 ligase complex. In PROTAC design, MZ1 is a classic example of how ternary-complex geometry, rather than binary affinity alone, can drive target selectivity among homologous bromodomain proteins. Its mechanism involves induced proximity between BRD4 and VHL, ubiquitination of BRD4, and proteasome-mediated removal. MZ1 is widely useful for studying BRD4-dependent transcription, BET-family selectivity, degrader linker effects, chromatin-regulatory target validation, and structure-guided optimization of VHL-recruiting PROTACs.

(2S,4R)-N-((S)-2-(tert-Butyl)-17-((S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)-4,16-dioxo-6,9,12-trioxa-3,15-diazaheptadecan-1-oyl)-4-hydroxy-1-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide

Structure of 1797406-69-9

Quality
Assurance

Worldwide
Delivery

24/7 Customer
Support
Category
PROTAC
Molecular Formula
C49H60ClN9O8S2
Molecular Weight
1002.64

* For research and manufacturing use only. Not for human or clinical use.

SizePriceStockQuantity
10 mg $199 In stock

Looking for different specifications? Click to request a custom quote!

Capabilities & Facilities

  • Comprehensive PROTAC Platform
  • Scientific Expertise & Technical Support
  • Custom Synthesis & Design Service
  • Extensive Product Coverage
  • Cutting-Edge Innovation
  • Fast Delivery & Global Support
  • 24/7 customer service
  • 100% quality assurance
Popular Publications Citing BOC Sciences Products
Purity
98%
ShelfLife
2 years
Storage
-20°C
IUPACName
(2S,4R)-1-[(2S)-2-[[2-[2-[2-[2-[[2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetyl]amino]ethoxy]ethoxy]ethoxy]acetyl]amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide
Synonyms
(2S,4R)-1-[(2S)-2-[[2-[2-[2-[2-[[2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetyl]amino]ethoxy]ethoxy]ethoxy]acetyl]amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide
InChI Key
PTAMRJLIOCHJMQ-PYNGZGNASA-N
InChI
InChI=1S/C49H60ClN9O8S2/c1-28-30(3)69-48-41(28)42(33-12-14-35(50)15-13-33)54-37(45-57-56-31(4)59(45)48)23-39(61)51-16-17-65-18-19-66-20-21-67-26-40(62)55-44(49(5,6)7)47(64)58-25-36(60)22-38(58)46(63)52-24-32-8-10-34(11-9-32)43-29(2)53-27-68-43/h8-15,27,36-38,44,60H,16-26H2,1-7H3,(H,51,61)(H,52,63)(H,55,62)/t36-,37+,38+,44-/m1/s1
SMILES
CC1=C(SC2=C1C(=NC(C3=NN=C(N32)C)CC(=O)NCCOCCOCCOCC(=O)NC(C(=O)N4CC(CC4C(=O)NCC5=CC=C(C=C5)C6=C(N=CS6)C)O)C(C)(C)C)C7=CC=C(C=C7)Cl)C
Mechanism

Target: This compound, MZ1, selectively targets BRD4 over related BET bromodomain proteins.

Binding site: Its JQ1-derived ligand binds BET bromodomain acetyl-lysine recognition pockets.

Mechanism of action: MZ1 is a VHL-recruiting BET PROTAC that preferentially induces degradation of BRD4 relative to BRD2 and BRD3. The molecule links a JQ1-derived BET bromodomain ligand to a VH032-derived VHL ligand through a PEG-containing linker, enabling cooperative ternary-complex formation between BRD4 and the VHL E3 ligase complex. This proximity promotes BRD4 ubiquitination and proteasome-dependent depletion, allowing researchers to study transcriptional regulation through target removal rather than bromodomain occupancy alone. MZ1 is useful for evaluating BET paralog selectivity, ternary-complex cooperativity, and degradation-driven suppression of BRD4-dependent gene-expression programs.

Applications

• Protac-Induced Protein Degradation: This compound serves as a potent PROTAC, facilitating the targeted degradation of disease-relevant proteins. By recruiting E3 ubiquitin ligases, it enables the ubiquitination and subsequent proteasomal degradation of specific proteins, offering a valuable tool for dissecting protein function and validating therapeutic targets in cellular models.

• Protein Homeostasis Research: Utilizing this PROTAC allows researchers to explore mechanisms of protein homeostasis and turnover. It provides insights into the dynamic balance of protein synthesis and degradation, crucial for understanding diseases characterized by protein aggregation or dysregulation.

• Target Validation in Drug Discovery: As a PROTAC, this molecule is instrumental in target validation studies within drug discovery pipelines. By selectively degrading target proteins, it aids in confirming the therapeutic relevance of specific proteins, streamlining the identification of viable drug targets.

• Functional Proteomics Applications: This PROTAC is an essential tool in functional proteomics, enabling the study of protein interactions and pathways. By degrading proteins of interest, it helps elucidate their roles and interactions within complex biological systems, advancing our understanding of cellular processes.

1. Ah receptor mediating induction of cytochrome P450IA1 in a novel continuous human liver cell line (Mz-Hep-1). Detection by binding with [3H]2,3,7,8-tetrachlorodibenzo-p-dioxin and relationship to the activity of aryl hydrocarbon hydroxylase
W G Dippold, E A Roberts, K C Johnson Biochem Pharmacol . 1991 Jul 15;42(3):521-8. doi: 10.1016/0006-2952(91)90314-u.
The Ah receptor regulates induction of cytochrome P450IA1 and mediates certain toxicities of polyhalogenated aromatics such as 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). It has been characterized previously in continuous cell lines, notably the mouse hepatoma line Hepa 1, the human squamous cell carcinoma line A431, and the human liver cell line Hep G2. The present work extends our knowledge of the Ah receptor in continuous human liver cell lines. Ah receptor can be detected in Mz-Hep-1, a hepatitis B virus-negative cell line derived from a Thorotrast-induced hepatocellular carcinoma. The mean concentration of Ah receptor in Mz-Hep-1 cells was 341 +/- 22 fmol/mg cytosol protein (mean +/- SEM, nine separate determinations). This is equivalent to approximately 30,000 sites per cell. The concentration of Ah receptor in Mz-Hep-1 cells is similar to that in Hepa 1 cells and approximately three times higher than that in Hep G2 cells. The Mz-Hep-1 Ah receptor sedimented in continuous sucrose gradients at approximately 9 S. Specificity of binding by [3H]TCDD was demonstrated by competitive binding of non-radiolabeled 2,3,7,8-tetrachlorodibenzofuran, 3-methylcholanthrene (MC), and dibenz[a,h]anthracene in 50-fold molar excess. Phenobarbital, which is not a substrate for P450IA1, did not compete with [3H]TCDD for binding to Mz-Hep-1 Ah receptor. Dexamethasone and estradiol also did not compete with [3H]TCDD for binding, suggesting non-identity of Ah receptor with glucocorticoid or estrogen receptor. In separate experiments, glucocorticoid receptor was identified in Mz-Hep-1 cells. By Scatchard plot analysis, the apparent equilibrium dissociation constant (Kd) for binding of [3H]TCDD to Mz-Hep-1 Ah receptor was estimated to be 4.4 nM, compared to 0.8 nM in Hepa 1 cells. By Woolf plot analysis the Kd was 5.4 nM, compared to 1.2 nM in Hepa 1 cells. The [3H]TCDD.Ah receptor complex extracted from nuclei of Mz-Hep-1 cells incubated with [3H]TCDD in culture at 37 degrees sedimented at approximately 6 S under conditions of high ionic strength. Aryl hydrocarbon hydroxylase (AHH) activity was detectable in Mz-Hep-1 cells after pretreatment with inducing chemicals. Mz-Hep-1 cells have the highest concentrations of Ah receptor in any continuous human liver cell line thus far investigated. The Mz-Hep-1 Ah receptor is similar physicochemically to that described in murine systems. AHH activity is inducible in Mz-Hep-1 cells.
2. Heterozygous MZ alpha-1-antitrypsin deficiency in adults with chronic liver disease
E Schrumpf, M K Fagerhol, H Bell Scand J Gastroenterol . 1990 Aug;25(8):788-92. doi: 10.3109/00365529008999216.
Pi phenotype was determined in 335 patients with liver diseases and compared with the results in 2830 healthy blood donors. Eleven of 335 patients had phenotype MZ (3.3%, compared with 2.9% in healthy blood donors (NS]. None of 53 patients with autoimmune chronic active hepatitis had the MZ phenotype, but it was found in 2 of 18 patients (11.1%) with cryptogenic cirrhosis, 3 of 78 (3.8%) with alcoholic liver cirrhosis, 2 of 36 (5.6%) with primary sclerosing cholangitis, and 1 of 26 (3.9%) with primary biliary cirrhosis. Altogether, 3 of 335 patients were homozygous for Pi ZZ and had cirrhosis. One of them (a male) developed a hepatoma and died. We conclude that the reported association between Pi MZ phenotype and chronic non-B active hepatitis does not seem to include patients with autoimmune chronic active hepatitis, whereas the possibility of an association between cryptogenic cirrhosis and the MZ phenotype cannot be excluded.
3. Alpha-1-Antitrypsin Pi*MZ Variant Increases Risk of Developing Hepatic Events in Nonalcoholic Fatty Liver Disease Patients
Arvind R Murali, Antonio J Sanchez, Sameer Prakash Clin Res Hepatol Gastroenterol . 2022 Dec 9;102066. doi: 10.1016/j.clinre.2022.102066.
Aims:Heterozygous alpha-1-antitrypsin (A1AT) Pi*MZ variant has been shown to increase the risk of developing liver cirrhosis in patients with non-alcoholic fatty liver disease (NAFLD). We aimed to determine the association between heterozygous Pi*MZ and Pi*MS variants and development of hepatic decompensation events in NAFLD patients.Methods:We included patients with NAFLD who also had A1AT genotyping performed from 2005-2020. We recorded demographic and clinical variables, and data on hepatic events (ascites, hepatic encephalopathy, esophageal variceal bleed, or hepatocellular carcinoma), if any. We performed binary logistic regression analysis to assess the association between A1AT variants and hepatic events, and calculated Odds ratio (OR) with their 95% confidence intervals (Cl).Results:We included 1532 patients with NAFLD, of which 1249 patients had Pi*MM, 121 had Pi*MS, and 162 had Pi*MZ. Of the 1532 patients, hepatic events developed in 521 (34%) patients. The percentage of patients with Pi*MZ variant was significantly higher in patients with hepatic events as compared to patients without hepatic events (18.7% vs 8.1%, p<0.0001). Pi*MZ variant was noted to significantly increase the odds of developing hepatic events in NAFLD patients, unadjusted OR: 1.82 (1.3-2.5, p<0.001), adjusted OR (for age, sex, body mass index, and diabetes mellitus) 1.76 (1.2-2.5, p=0.002). Pi*MS variant did not increase the odds of hepatic events in NAFLD patients, OR: 0.92 (0.6-1.4, p=0.70).Conclusion:Patients with NAFLD and A1AT Pi*MZ variant are at increased risk for developing hepatic decompensation. NAFLD patients should be offered A1AT genotyping for risk stratification, counseling, and multidisciplinary intervention for NAFLD.

What are the characteristics of MZ 1?

MZ 1 is characterized as a proteolysis-targeting chimera (PROTAC) and contains JQ-1, which binds bromo- and extra-terminal (BET) proteins, linked to a ligand for the E3 ubiquitin ligase VHL.

06/8/2021

induce the selective degradation of BRD4

It worked well without trouble. MZ1 induces the selective degradation of BRD4 in HeLa cells when used at 0.1-0.5 μM.

09/11/2018

cause the removal of bromodomain-containing protein

Worked adequately. At concentrations of 2-10 μM, MZ1 causes the removal of bromodomain-containing protein (BRD)2, BRD3, and BRD4.

27/1/2019

Stock concentration: *
Desired final volume: *
Desired concentration: *

L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

Related Product Recommendations

BOC Sciences Support

Please contact us with any specific requirements and we will get back to you as soon as possible.


  • Verification code

We invite you to contact us at or through our contact form above for more information about our services and products.

USA
  • International:
  • US & Canada (Toll free):
  • Email:
  • Fax:
Germany
Inquiry Basket