3,6,9,12,15,18,21-Heptaoxatetracos-23-yn-1-ol

 CAS No.: 1422023-54-8  Cat No.: BP-501379  Purity: ≥95% 4.5  

3,6,9,12,15,18,21-Heptaoxatetracos-23-yn-1-ol is a polyethylene glycol–like, ether-rich PROTAC linker featuring a terminal hydroxyl group at one end and a terminal alkyne at the other suitable for orthogonal conjugation strategies. The seven ether oxygens provide conformational flexibility and aqueous solubility, helping to spatially separate the two binding motifs of a PROTAC so that the E3 ligase ligand and the target-binding warhead can engage their respective proteins without steric clashes. The terminal hydroxyl and the alkyne enable modular attachment to other components via widely used coupling and click-type chemistries, allowing researchers to tune linker length and rigidity while maintaining defined attachment points. In targeted protein degradation research, such ether- and alkyne-functional linkers are valuable for systematically optimizing ternary complex formation, degradation potency, and selectivity across linker series, thereby accelerating structure–activity relationship studies.

3,6,9,12,15,18,21-Heptaoxatetracos-23-yn-1-ol

Structure of 1422023-54-8

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Category
PROTAC Linker
Molecular Formula
C17H32O8
Molecular Weight
364.43
Related CAS
32199-97-6 (polymer)
Appearance
Pale Yellow or Colorless Oily Matter

* For research and manufacturing use only. Not for human or clinical use.

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Popular Publications Citing BOC Sciences Products
Purity
≥95%
Solubility
Soluble in DCM, DMF, DMSO, Water
Appearance
Pale Yellow or Colorless Oily Matter
Storage
Store at 2-8°C
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
2-[2-[2-[2-[2-[2-(2-prop-2-ynoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol
Synonyms
Propargyl-PEG8-alcohol; Propargyl-PEG7-OH; Alkyne-PEG7-OH
Boiling Point
447.2±40.0°C at 760 mmHg
Density
1.1±0.1 g/cm3
InChI Key
QIJKIPMHDKPKLA-UHFFFAOYSA-N
InChI
InChI=1S/C17H32O8/c1-2-4-19-6-8-21-10-12-23-14-16-25-17-15-24-13-11-22-9-7-20-5-3-18/h1,18H,3-17H2
SMILES
C#CCOCCOCCOCCOCCOCCOCCOCCO
1. Silver(I) Complexes of the Derivatized Crown Thioether Ligands 3,6,9,12,15,18-Hexathianonadecanol and 3,6,9,13,16,19-Hexathiaicosanol. Determination of Stability Constants and the Crystal Structures of [Ag(19-aneS6-OH)][CF(3)SO(3)] and [Ag(20-aneS6-OH)][BF(4)]
Roger Alberto, Walter Nef, Alan Smith, Thomas A. Kaden, Markus Neuburger, Margareta Zehnder, Alfred Frey, Ulrich Abram, P. August Schubiger Inorg Chem. 1996 May 22;35(11):3420-3427.doi: 10.1021/ic951421y.
The derivatized 19- and 20-membered macrocyclic thio crowns 3,6,9,12,15,18-hexathianonadecanol C(13)H(26)OS(6) (19-aneS6-OH) (1) and 3,6,9,13,16,19-hexathiacycloicosanol C(14)H(28)OS(6) (20-aneS6-OH) (2) have been synthesized by [1 + 1] cyclization in about 30% yield. The ligands 1 and 2 react readily at room temperature with different silver(I) salts in water and in organic solvents to form in quantitative yields the complexes [Ag(19-aneS6-OH)](+) (3) and [Ag(20-aneS6-OH)](+) (4) for which crystals of X-ray quality were grown by slow diffusion of diethylether into methanol. [Ag(19-aneS6-OH)][CF(3)SO(3)] crystallizes in the triclinic space group P&onemacr; with Z = 2, a = 10.760(1), b = 10.853(2) and c = 11.326(2)Å, and alpha = 78.73(1), beta = 73.47(1), and gamma = 74.99(1) degrees. [Ag(20-aneS6-OH)][BF(4)] also crystallizes in the triclinic space group P&onemacr; with Z = 4. The unit cell constants were determined with a = 10.076(4), b = 10.525(3), and c = 22.135(8)Å, alpha = 93.32(2), beta = 102.43(2), and gamma = 100.32(2) degrees. The complex cations [Ag(19-aneS6-OH)](+) and [Ag(20-aneS6-OH)](+) are coordinated through only four sulfur atoms; thus, a distorted tetrahedral coordination geometry is exhibited. In addition we found a highly asymmetric Ag-S bond lengths distribution throughout all complex cations. The stability constants of [Ag](+) with 1 and 2 and, for comparison with [18-aneS6] (5), have been determined in methanol by potentiometric [Ag](+) measurements. Log K values for the formation of 3, 4, and [Ag(18-aneS6](+) (6) are 12.04 +/- 0.19, 11.49 +/- 0.15, and 12.67 +/- 0.13 respectively. Owing to a comparable macrocyclic effect, the similar log K values are reasonable but, since 6 coordinates octahedrally, not expected. (1)H and (13)C NMR investigations at various temperatures give evidence for fluxional coordinative behavior between all six sulfur atoms in solution. Consequently [Ag(19-aneS6-OH)](+), [Ag(20-aneS6-OH)](+), and [Ag(18-aneS6](+) seem to exhibit principally the same solution structures although the solid structures are very different.
2. Healing potential of Spirulina platensis for skin wounds by modulating bFGF, VEGF, TGF-ß1 and α-SMA genes expression targeting angiogenesis and scar tissue formation in the rat model
Zizy I Elbialy, Doaa H Assar, Aml Abdelnaby, Samah Abu Asa, Ehab Y Abdelhiee, Samar S Ibrahim, Mohamed M Abdel-Daim, Rafa Almeer, Ayman Atiba Biomed Pharmacother. 2021 May;137:111349.doi: 10.1016/j.biopha.2021.111349.Epub 2021 Feb 7.
Blue-green microalga Spirulina platensis (SP) gained more attention for its antioxidant and/or anti-inflammatory properties magnifying its beneficial effects as a feed additive and for cosmetic and biomedical applications. This study was performed to examine the impact of SP on the cutaneous wound and burn healing and to develop an understanding of the correlation between the sequelae of wound healing and the molecular expression patterns of wound healing-related genes as angiogenic basic fibroblast growth factor (bFGF) and vascular endothelial growth factor (VEGF) and fibrosis-related genes as transforming growth factor-β (TGF-β) and α-smooth muscle actin (α-SMA) in rat wound models. To achieve these goals, two experiments were performed on 32 Wister male rats that were divided into 4 groups of 8 rats each. Each experiment was represented by 2 groups; the control group (CG) and the Spirulina group (SG). A full-thickness wound (1.5 × 1.5 cm) and burn wound (2 × 2 cm) were made on the back of each generally anaesthetized rat and the areas of wound and burn were measured on days of 0, 3, 6, 9, 12, and 15 and 0, 3, 6, 9, 12, 15, 18, and 21 post-wound and post-burn respectively. In both experiments, SP was topically applied on the backs of wounded and burned rats in Spirulina treated groups. The phases of wound granulation tissues were detected histopathologically. Immunohistochemistry was used to determine the expressions of (TGF-B1) and (VEGF). Furthermore, the relative quantification of gene expression was implemented using the (bFGF), (VEGF), (TGF-Ɓ1), and (α-SMA) as target genes. Histopathological examination revealed inflammatory cell infiltration, angiogenesis, epithelialization, and extracellular matrix deposition and wound contraction in SG as compared to CG in both experiments. Immunohistochemistry results showed a significant improvement in the VEGF and TGF-β1 expression levels of SG in both experiments. Interestingly, SG in both experiments revealed upregulation of angiogenic genes (bFGF and VEGF) and downregulation of fibrotic genes (TGF-β1 and α-SMA). In conclusion, our findings suggest that the topically applied Spirulina promoted wound healing. Thus, SP can be used as a biomedical application to treat various skin wounds and may reveal a potential molecular basis for future promising antifibrotic agents against scar formation.
3. Dietary 25-Hydroxyvitamin D3 Supplementation Modulates Intestinal Cytokines in Young Broiler Chickens
Gerardo A Abascal-Ponciano, Samuel F Leiva, Joshua J Flees, Luis P Avila, Jessica D Starkey, Charles W Starkey Front Vet Sci. 2022 Jul 11;9:947276.doi: 10.3389/fvets.2022.947276.eCollection 2022.
Vitamin D signaling is important for intestinal homeostasis. An increase in vitamin D receptors in immune cells can modulate cell phenotype and cytokine secretion. Cytokines regulate both pro- (interleukin 17; IL-17) and anti-inflammatory (IL-10) responses triggered by external stimuli. Inflammation in intestinal tissues can disrupt the structure and the remodeling of epithelial tight junction complexes, thus, compromising the protective barrier. The objective of the study was to determine the impact of dietary supplementation with 25-hydroxycholecalciferol (25OHD3), a hydroxylated metabolite of vitamin D, on intestinal cytokine abundance and epithelial barrier integrity over time in broilers. A randomized complete block design experiment was conducted to evaluate the effect of dietary 25OHD3 inclusion on relative protein expression of the cytokines, IL-17 and IL-10, and tight junction proteins, Zona Occludens 1 (ZO-1), and Claudin-1 (CLD-1), in broiler chicken duodenum and ileum from 3 to 21 days post-hatch. On day 0, male chicks (n = 168) were randomly assigned to raised floor pens. Experimental corn-soybean meal-based treatments were as follows: (1) a common starter diet containing 5,000 IU of D3 per kg of feed (VITD3) and (2) a common starter diet containing 2,240 IU of D3 + 2,760 IU of 25OHD3 per kg of feed (25OHD3) fed from days 0 to 21. On days 3, 6, 9, 12, 15, 18, and 21, 12 birds per treatment were euthanized to collect tissue samples for quantitative, multiplex, and fluorescent Western blot analysis. Target proteins were quantified using Image Quant TL 8.1 and expressed relative to total protein. Feeding 25OHD3 post-hatch decreased ileal IL-10 (anti-inflammatory) protein expression in 21-day-old broilers compared with VITD3 only (P = 0.0190). Broilers fed only VITD3 post-hatch had greater IL-17 (pro-inflammatory) protein expression in the ileum at 18 and 21 days-of-age (P = 0.0412) than those that fed 25OHD3. Dietary inclusion of 25OHD3 lowered the abundance of key inflammatory cytokines in the ileum of young broilers.

This PROTAC linker, 3,6,9,12,15,18,21-Heptaoxatetracos-23-yn-1-ol, is designed to provide a flexible, polyether-based spacer terminating in a functional alcohol for conjugation to targeting ligands. Its ether-rich backbone supports solubility and conformational adaptability, while the terminal propargyl motif enables reliable “click” coupling strategies commonly used in targeted protein degradation workflows. The sections below describe its structural features and practical reactivity considerations in PROTAC assembly.

Structure: The linker contains a long polyether chain with multiple ether oxygen atoms and a terminal primary alcohol. A carbon–carbon triple bond (alkyne) is present for bioorthogonal coupling. The ether-rich scaffold imparts polarity and flexibility, supporting favorable handling and linker-ligand spacing in PROTAC constructs.

Reactivity: The terminal alkyne is suitable for copper-catalyzed azide–alkyne cycloaddition (CuAAC), enabling efficient formation of triazole linkages during PROTAC synthesis; SPAAC is not applicable to this unstrained alkyne. The primary alcohol can be converted to activated derivatives (for example, carbonate or ester intermediates) using standard coupling reagents under mild base/acid conditions, depending on the chosen ligand chemistry. Typical solvents include polar aprotic media, with copper sources and stabilizing ligands used when performing CuAAC.

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It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O √ c22h30n40 ╳
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