Androgen receptor antagonist 1 is an androgen receptor ligand that binds the receptor ligand-binding domain and can be used as a target-recognition element for AR-directed PROTAC synthesis. In a bifunctional degrader, the antagonist-derived moiety engages androgen receptor, while a linker connects it to an E3 ligase recruiter to promote receptor proximity to ubiquitination machinery. Productive ternary complex formation can induce androgen receptor ubiquitination and proteasome-dependent depletion. This strategy enables researchers to study receptor protein loss beyond ligand antagonism, including effects on transcriptional regulation, receptor scaffold function, chromatin-associated complexes, and ligand-binding domain dependence. Androgen receptor antagonist 1 is useful for AR degrader development, nuclear receptor chemical biology, linker attachment analysis, target engagement assays, and comparison of antagonist-derived warheads in hormone receptor degradation workflows.
Structure of 1338812-36-4
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Target: This ligand targets the androgen receptor (AR) ligand-binding domain in biochemical or cellular target-engagement studies.
Mechanism of Action: Used as the target-protein recognition element, this ligand provides the binding interface for the androgen receptor (AR) ligand-binding domain. In PROTAC design, a derivatizable position on the ligand can be connected through an optimized linker to an E3 ligase ligand, such as a CRBN, VHL, or IAP recruiter, while preserving productive target engagement. The resulting bifunctional molecule brings the androgen receptor (AR) ligand-binding domain into proximity with the recruited E3 ligase, enabling ternary-complex formation. If the complex has favorable geometry and residence time, target lysine ubiquitination is promoted, leading to proteasome-dependent degradation in experimental systems.
Applications• PROTAC-Mediated AR Degradation: Use Androgen receptor antagonist 1 as a targeting ligand to build androgen receptor (AR) PROTACs that recruit an E3 ligase and drive ubiquitination-dependent AR removal. This supports studies of AR turnover kinetics, dependency on ubiquitin–proteasome activity, and the impact of degradation versus inhibition on downstream transcriptional programs.
• E3 Ligase Recruitment Optimization: Pair Androgen receptor antagonist 1 with different E3 ligase-recruiting modules to systematically tune ternary complex formation and degradation potency. Researchers can vary linker length, attachment points, and stereochemistry to map structure–activity relationships that govern AR engagement, residence time, and efficient ubiquitin transfer.
• Resistance Mechanism Dissection: Apply AR-targeting PROTACs derived from Androgen receptor antagonist 1 to probe mechanisms underlying resistance to conventional AR antagonists. By comparing degradation efficiency and AR signaling suppression across resistant models, experiments can distinguish whether resistance arises from altered AR stability, ligand binding, or impaired proteasomal processing.
• Transcriptional Output Remodeling Studies: Employ Androgen receptor antagonist 1-based PROTACs to evaluate how selective AR degradation reshapes androgen-responsive gene expression. Time-course analyses can correlate AR loss with changes in co-regulator recruitment, chromatin occupancy, and persistence of AR-dependent transcription, enabling mechanistic comparisons with AR inhibition-only approaches.
Androgen receptor antagonist 1 is a androgen receptor ligand intended for use as the target-engaging component or reference ligand in PROTAC discovery workflows. Its known small-molecule recognition profile enables rational linker-vector evaluation and comparative degrader design. This molecule is described in detail below.
Structure: The structure of Androgen receptor antagonist 1 is characterized by amide/urea/sulfonamide hydrogen-bonding motifs; phenol or alcohol functionality; halogenated aryl/heteroaryl ring system; heteroaromatic protein-recognition scaffold. These features provide defined hydrogen-bonding, hydrophobic, and steric elements that can support affinity retention while enabling analogue-based linker-vector selection.
Reactivity: The hydroxy or phenolic motif can be considered for ether, carbonate, carbamate, or ester linker attachment after SAR verification. For PROTAC construction, the POI ligand can be paired with CRBN ligands such as thalidomide, pomalidomide, or lenalidomide analogues, VHL ligands such as VH032 derivatives, or less common IAP/MDM2/cIAP-recruiting ligands, with alkyl, PEG, piperazine, triazole, or amide linkers screened for ternary-complex formation. In practice, incorporation into PROTACs should begin from derivatives that preserve the reported binding pharmacophore, followed by systematic variation of linker length, polarity, rigidity, and exit-vector geometry to optimize target engagement, E3 recruitment, and cellular degradation readouts.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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