I-BET762 carboxylic acid is a BET bromodomain-targeting ligand-linker building block derived from the I-BET762 scaffold and is designed for conjugation in PROTAC synthesis. It recognizes acetyl-lysine binding pockets in BET-family bromodomains and provides a functionalized handle suitable for connection to an E3 ligase recruiter. In degrader construction, the I-BET762-derived moiety acts as the target protein ligand, while the carboxylic acid functionality enables linker installation and assembly of a heterobifunctional molecule. The resulting PROTAC is intended to recruit BET proteins to ubiquitination machinery, promote ternary complex formation, and induce proteasome-dependent depletion. This reagent is useful for BET degrader synthesis, BRD protein target engagement studies, chromatin reader biology, transcriptional dependency research, linker optimization, and comparison of different BET-binding warheads in epigenetic targeted degradation workflows.
Structure of 1300019-38-8
* For research and manufacturing use only. Not for human or clinical use.
| Size | Price | Stock | Quantity |
|---|---|---|---|
| 5 mg | $298 | In stock |
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Target: This ligand targets BET-family bromodomains, particularly BRD4 bromodomains used as the parent ligand scaffold in biochemical or cellular target-engagement studies.
Mechanism of Action: Used as the target-protein recognition element, this ligand provides the binding interface for BET-family bromodomains, particularly BRD4 bromodomains used as the parent ligand scaffold. In PROTAC design, a derivatizable position on the ligand can be connected through an optimized linker to an E3 ligase ligand, such as a CRBN, VHL, or IAP recruiter, while preserving productive target engagement. The resulting bifunctional molecule brings BET-family bromodomains into proximity with the recruited E3 ligase, enabling ternary-complex formation. If the complex has favorable geometry and residence time, target lysine ubiquitination is promoted, leading to proteasome-dependent degradation in experimental systems.
Applications• BET Target Degradation Strategy: I-BET762 carboxylic acid can serve as a high-affinity BET bromodomain ligand module within PROTAC constructs to recruit an E3 ligase and trigger selective degradation of BET family proteins. This enables mechanistic studies of how disrupting BRD-mediated chromatin recognition alters transcriptional programs and downstream oncogenic pathways.
• BRD4-Driven Transcription Remodeling: As a PROTAC warhead, I-BET762 carboxylic acid supports targeted elimination of BRD4 and related BET proteins, allowing researchers to dissect BET-dependent gene regulation. Degradation-based perturbations can be compared against occupancy-only inhibition to quantify changes in promoter accessibility, super-enhancer activity, and mRNA output.
• E3 Ligase Recruitment Optimization: The carboxylic acid functionality of I-BET762 facilitates linker attachment for PROTAC synthesis, enabling systematic tuning of linker length, polarity, and geometry. Such optimization can improve ternary complex formation, increase degradation potency, and reduce off-target effects by refining the balance between BET ligand engagement and E3 ligase proximity.
• Proteome-Wide BET Selectivity Mapping: Using I-BET762 carboxylic acid in PROTAC designs supports proteomics-driven evaluation of degradation selectivity across BET family members and broader chromatin-associated factors. Researchers can apply quantitative mass spectrometry to determine degradation kinetics, pathway dependence, and compensatory responses, strengthening target validation and mechanism-of-action interpretation.
I-BET762 carboxylic acid is a BET bromodomain target ligand intended for use as the target-engaging component or reference ligand in PROTAC discovery workflows. Its known small-molecule recognition profile enables rational linker-vector evaluation and comparative degrader design. This molecule is described in detail below.
Structure: The structure of I-BET762 carboxylic acid is characterized by carboxylic acid or carboxylate handle; halogenated aryl/heteroaryl ring system; heteroaromatic protein-recognition scaffold. These features provide defined hydrogen-bonding, hydrophobic, and steric elements that can support affinity retention while enabling analogue-based linker-vector selection.
Reactivity: The acid handle supports amide coupling with amino-PEG, alkyl-diamine, piperazine, or aminoalkyl E3-ligase ligands. For PROTAC construction, the POI ligand can be paired with CRBN ligands such as thalidomide, pomalidomide, or lenalidomide analogues, VHL ligands such as VH032 derivatives, or less common IAP/MDM2/cIAP-recruiting ligands, with alkyl, PEG, piperazine, triazole, or amide linkers screened for ternary-complex formation. In practice, incorporation into PROTACs should begin from derivatives that preserve the reported binding pharmacophore, followed by systematic variation of linker length, polarity, rigidity, and exit-vector geometry to optimize target engagement, E3 recruitment, and cellular degradation readouts.
What is the inhibition effect of I-BET762 carboxylic acid on BRD4?
pIC50 is 5.1
03/4/2019
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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