I-BET762 carboxylic acid

 CAS No.: 1300019-38-8  Cat No.: BP-300009 4.5  

I-BET762 carboxylic acid is a BET bromodomain-targeting ligand-linker building block derived from the I-BET762 scaffold and is designed for conjugation in PROTAC synthesis. It recognizes acetyl-lysine binding pockets in BET-family bromodomains and provides a functionalized handle suitable for connection to an E3 ligase recruiter. In degrader construction, the I-BET762-derived moiety acts as the target protein ligand, while the carboxylic acid functionality enables linker installation and assembly of a heterobifunctional molecule. The resulting PROTAC is intended to recruit BET proteins to ubiquitination machinery, promote ternary complex formation, and induce proteasome-dependent depletion. This reagent is useful for BET degrader synthesis, BRD protein target engagement studies, chromatin reader biology, transcriptional dependency research, linker optimization, and comparison of different BET-binding warheads in epigenetic targeted degradation workflows.

I-BET762 carboxylic acid

Structure of 1300019-38-8

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Ligand for Target Protein
Molecular Formula
C20H17ClN4O3
Molecular Weight
396.83

* For research and manufacturing use only. Not for human or clinical use.

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5 mg $298 In stock

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Solubility
DMSO : 7.14 mg/mL (ultrasonic)
Storage
Powder -20°C 3 years; 4°C 2 years; In solvent -80°C 6 months; -20°C 1 month
Shipping
Room temperature in continental US; may vary elsewhere
IUPACName
2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]acetic acid
Synonyms
Molibresib carboxylic acid; GSK525762A carboxylic acid; PROTAC BRD4-binding moiety 2
InChI Key
VEIZLTSJCDOIBH-INIZCTEOSA-N
InChI
InChI=1S/C20H17ClN4O3/c1-11-23-24-20-16(10-18(26)27)22-19(12-3-5-13(21)6-4-12)15-9-14(28-2)7-8-17(15)25(11)20/h3-9,16H,10H2,1-2H3,(H,26,27)/t16-/m0/s1
SMILES
CC1=NN=C2N1C3=C(C=C(C=C3)OC)C(=NC2CC(=O)O)C4=CC=C(C=C4)Cl
Mechanism

Target: This ligand targets BET-family bromodomains, particularly BRD4 bromodomains used as the parent ligand scaffold in biochemical or cellular target-engagement studies.

Mechanism of Action: Used as the target-protein recognition element, this ligand provides the binding interface for BET-family bromodomains, particularly BRD4 bromodomains used as the parent ligand scaffold. In PROTAC design, a derivatizable position on the ligand can be connected through an optimized linker to an E3 ligase ligand, such as a CRBN, VHL, or IAP recruiter, while preserving productive target engagement. The resulting bifunctional molecule brings BET-family bromodomains into proximity with the recruited E3 ligase, enabling ternary-complex formation. If the complex has favorable geometry and residence time, target lysine ubiquitination is promoted, leading to proteasome-dependent degradation in experimental systems.

Applications

• BET Target Degradation Strategy: I-BET762 carboxylic acid can serve as a high-affinity BET bromodomain ligand module within PROTAC constructs to recruit an E3 ligase and trigger selective degradation of BET family proteins. This enables mechanistic studies of how disrupting BRD-mediated chromatin recognition alters transcriptional programs and downstream oncogenic pathways.

• BRD4-Driven Transcription Remodeling: As a PROTAC warhead, I-BET762 carboxylic acid supports targeted elimination of BRD4 and related BET proteins, allowing researchers to dissect BET-dependent gene regulation. Degradation-based perturbations can be compared against occupancy-only inhibition to quantify changes in promoter accessibility, super-enhancer activity, and mRNA output.

• E3 Ligase Recruitment Optimization: The carboxylic acid functionality of I-BET762 facilitates linker attachment for PROTAC synthesis, enabling systematic tuning of linker length, polarity, and geometry. Such optimization can improve ternary complex formation, increase degradation potency, and reduce off-target effects by refining the balance between BET ligand engagement and E3 ligase proximity.

• Proteome-Wide BET Selectivity Mapping: Using I-BET762 carboxylic acid in PROTAC designs supports proteomics-driven evaluation of degradation selectivity across BET family members and broader chromatin-associated factors. Researchers can apply quantitative mass spectrometry to determine degradation kinetics, pathway dependence, and compensatory responses, strengthening target validation and mechanism-of-action interpretation.

1. Prostate cancer-associated SPOP mutations confer resistance to BET inhibitors through stabilization of BRD4
Kouhei Shimizu, Mark A Rubin, Shangqian Wang, Qing Zhong, Hiroyuki Inuzuka, Levi A Garraway, Andrew H Beck, Ling Huang, Wenyi Wei, Liewei Wang, Xiaoning Li, Jianping Guo, Ting Chen, Wei Zhang, Francisco Beca, Jinfang Zhang, Xiangpeng Dai, Lorenz Buser, Peter J Wild, Kwok-Kin Wong, James E Bradner, Yu Chen, Pengda Liu, Jun Qi, Jiaoti Huang, Senthil K Muthuswamy, Mirjam Blattner, Christopher E Barbieri, Dennis L Buckley, Shengwu Liu, Wenjian Gan, Divya Vasudevan Nat Med . 2017 Sep;23(9):1063-1071. doi: 10.1038/nm.4378.
The bromodomain and extraterminal (BET) family of proteins comprises four members-BRD2, BRD3, BRD4 and the testis-specific isoform BRDT-that largely function as transcriptional coactivators and play critical roles in various cellular processes, including the cell cycle, apoptosis, migration and invasion. BET proteins enhance the oncogenic functions of major cancer drivers by elevating the expression of these drivers, such as c-Myc in leukemia, or by promoting the transcriptional activities of oncogenic factors, such as AR and ERG in prostate cancer. Pathologically, BET proteins are frequently overexpressed and are clinically linked to various types of human cancer; they are therefore being pursued as attractive therapeutic targets for selective inhibition in patients with cancer. To this end, a number of bromodomain inhibitors, including JQ1 and I-BET, have been developed and have shown promising outcomes in early clinical trials. Although resistance to BET inhibitors has been documented in preclinical models, the molecular mechanisms underlying acquired resistance are largely unknown. Here we report that cullin-3SPOPearmarks BET proteins, including BRD2, BRD3 and BRD4, for ubiquitination-mediated degradation. Pathologically, prostate cancer-associated SPOP mutants fail to interact with and promote the degradation of BET proteins, leading to their elevated abundance in SPOP-mutant prostate cancer. As a result, prostate cancer cell lines and organoids derived from individuals harboring SPOP mutations are more resistant to BET-inhibitor-induced cell growth arrest and apoptosis. Therefore, our results elucidate the tumor-suppressor role of SPOP in prostate cancer in which it acts as a negative regulator of BET protein stability and also provide a molecular mechanism for resistance to BET inhibitors in individuals with prostate cancer bearing SPOP mutations.
2. Suppression of inflammation by a synthetic histone mimic
Charles M Rice, Alexander Tarakhovsky, Jose M Lora, Hervé Coste, Kate L Jeffrey, Paul Wilson, Julia White, Jorge Kirilovsky, Scott Dewell, Rohit Chandwani, Rab K Prinjha, Chun-Wa Chung, Kevin Lee, Ivan Marazzi, Edwige Nicodeme, Uwe Schaefer, Soren Beinke Nature . 2010 Dec 23;468(7327):1119-23. doi: 10.1038/nature09589.
Interaction of pathogens with cells of the immune system results in activation of inflammatory gene expression. This response, although vital for immune defence, is frequently deleterious to the host due to the exaggerated production of inflammatory proteins. The scope of inflammatory responses reflects the activation state of signalling proteins upstream of inflammatory genes as well as signal-induced assembly of nuclear chromatin complexes that support mRNA expression. Recognition of post-translationally modified histones by nuclear proteins that initiate mRNA transcription and support mRNA elongation is a critical step in the regulation of gene expression. Here we present a novel pharmacological approach that targets inflammatory gene expression by interfering with the recognition of acetylated histones by the bromodomain and extra terminal domain (BET) family of proteins. We describe a synthetic compound (I-BET) that by 'mimicking' acetylated histones disrupts chromatin complexes responsible for the expression of key inflammatory genes in activated macrophages, and confers protection against lipopolysaccharide-induced endotoxic shock and bacteria-induced sepsis. Our findings suggest that synthetic compounds specifically targeting proteins that recognize post-translationally modified histones can serve as a new generation of immunomodulatory drugs.
3. Bromodomain proteins regulate human cytomegalovirus latency and reactivation allowing epigenetic therapeutic intervention
Michal Schwartz, Aharon Nachshon, Mark R Wills, Sarah E Jackson, Emma L Poole, David F Tough, John H Sinclair, Rab K Prinjha, Ian J Groves, Batsheva Rozman Proc Natl Acad Sci U S A . 2021 Mar 2;118(9):e2023025118. doi: 10.1073/pnas.2023025118.
Reactivation of human cytomegalovirus (HCMV) from latency is a major health consideration for recipients of stem-cell and solid organ transplantations. With over 200,000 transplants taking place globally per annum, virus reactivation can occur in more than 50% of cases leading to loss of grafts as well as serious morbidity and even mortality. Here, we present the most extensive screening to date of epigenetic inhibitors on HCMV latently infected cells and find that histone deacetylase inhibitors (HDACis) and bromodomain inhibitors are broadly effective at inducing virus immediate early gene expression. However, while HDACis, such as myeloid-selective CHR-4487, lead to production of infectious virions, inhibitors of bromodomain (BRD) and extraterminal proteins (I-BETs), including GSK726, restrict full reactivation. Mechanistically, we show that BET proteins (BRDs) are pivotally connected to regulation of HCMV latency and reactivation. Through BRD4 interaction, the transcriptional activator complex P-TEFb (CDK9/CycT1) is sequestered by repressive complexes during HCMV latency. Consequently, I-BETs allow release of P-TEFb and subsequent recruitment to promoters via the superelongation complex (SEC), inducing transcription of HCMV lytic genes encoding immunogenic antigens from otherwise latently infected cells. Surprisingly, this occurs without inducing many viral immunoevasins and, importantly, while also restricting viral DNA replication and full HCMV reactivation. Therefore, this pattern of HCMV transcriptional dysregulation allows effective cytotoxic immune targeting and killing of latently infected cells, thus reducing the latent virus genome load. This approach could be safely used to pre-emptively purge the virus latent reservoir prior to transplantation, thereby reducing HCMV reactivation-related morbidity and mortality.

I-BET762 carboxylic acid is a BET bromodomain target ligand intended for use as the target-engaging component or reference ligand in PROTAC discovery workflows. Its known small-molecule recognition profile enables rational linker-vector evaluation and comparative degrader design. This molecule is described in detail below.

Structure: The structure of I-BET762 carboxylic acid is characterized by carboxylic acid or carboxylate handle; halogenated aryl/heteroaryl ring system; heteroaromatic protein-recognition scaffold. These features provide defined hydrogen-bonding, hydrophobic, and steric elements that can support affinity retention while enabling analogue-based linker-vector selection.

Reactivity: The acid handle supports amide coupling with amino-PEG, alkyl-diamine, piperazine, or aminoalkyl E3-ligase ligands. For PROTAC construction, the POI ligand can be paired with CRBN ligands such as thalidomide, pomalidomide, or lenalidomide analogues, VHL ligands such as VH032 derivatives, or less common IAP/MDM2/cIAP-recruiting ligands, with alkyl, PEG, piperazine, triazole, or amide linkers screened for ternary-complex formation. In practice, incorporation into PROTACs should begin from derivatives that preserve the reported binding pharmacophore, followed by systematic variation of linker length, polarity, rigidity, and exit-vector geometry to optimize target engagement, E3 recruitment, and cellular degradation readouts.

What is the inhibition effect of I-BET762 carboxylic acid on BRD4?

pIC50 is 5.1

03/4/2019

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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