PEG5-bis-(Ethyl phosphonate)
PEG5-bis-(Ethyl phosphonate) is a polyethylene glycol–based bifunctional linker bearing two ethyl phosphonate groups at the termini of a five–ethylene glycol chain. The diethyl phosphonate termini are neutral, protected phosphonate groups that can be de-esterified to phosphonic acids when needed, while the PEG segment imparts aqueous solubility and conformational flexibility. In PROTAC and targeted degradation workflows, such a linker can be used to spatially separate and tune the relative orientation of the two cooperating ligands (a target-binding moiety and an E3 ligase recruiter), thereby influencing productive ternary complex formation and degradation efficiency. Its PEG backbone can reduce nonspecific hydrophobic interactions and improve handling in biological buffers, while the bis-phosphonate ends mainly serve as protected polar motifs rather than standard direct covalent-coupling handles. This makes PEG5-bis-(Ethyl phosphonate) a useful scaffold for systematic linker optimization in targeted protein degradation research.
Structure of 1446282-28-5
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* For research and manufacturing use only. Not for human or clinical use.
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PEG5-bis-(Ethyl phosphonate) is a bifunctional, PEG-based linker designed to support targeted protein degradation workflows by enabling robust conjugation between PROTAC-binding modules. Its phosphonate termini provide chemically addressable handles that can be used to assemble linker architectures with controlled spacing and improved solubility. The resulting constructs are well suited for building PROTACs where stable, water-compatible linkers are advantageous; detailed structural and reactivity considerations are provided below.
Structure: The linker consists of an ethylene glycol (PEG) scaffold bearing two ethyl phosphonate groups at the termini. It features ether linkages within the PEG chain and fully esterified diethyl phosphonate termini; no phosphonic-acid P–OH groups are present in the protected form. Overall, it is expected to be flexible and hydrophilic, supporting aqueous handling.
Reactivity: The diethyl phosphonate groups can be converted to phosphonic acids by appropriate dealkylation if phosphonic-acid functionality is required for subsequent coupling. Direct base-mediated deprotonation of a phosphonic-acid P–OH is not applicable to these fully esterified termini; reaction planning should account for the protected diethyl phosphonate state. Solvent systems that maintain phosphonate stability and solubility of PEG conjugates are generally preferred, with reaction monitoring by standard analytical methods to confirm completion and minimize side reactions.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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