TX1-85-1

 CAS No.: 1603845-32-4  Cat No.: BP-300161  Purity: ≥98% 4.5  

TX1-85-1 is a covalent ligand for HER3, also known as ErbB3, and is notable as a selective small-molecule binder of a pseudokinase domain that has traditionally been difficult to address with conventional kinase inhibitors. The ligand engages the ATP-binding region and forms a covalent interaction with a cysteine residue in HER3, providing a distinctive warhead for HER3-directed degradation concepts. In a PROTAC-like design, a TX1-85-1-derived moiety could bind HER3, while a linker connects it to an E3 ligase recruiter to promote induced proximity with ubiquitination machinery. The intended function would be HER3 ubiquitination and proteasome-dependent depletion, supporting studies of HER3 signaling adaptor roles, receptor complex biology, and kinase-impaired receptor targeting. TX1-85-1 is useful for HER3 chemical biology, covalent ligand development, degrader feasibility studies, and ErbB-network research.

TX1-85-1

Structure of 1603845-32-4

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Ligand for Target Protein
Molecular Formula
C32H36N8O3
Molecular Weight
580.7
Appearance
Crystalline Solid

* For research and manufacturing use only. Not for human or clinical use.

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Popular Publications Citing BOC Sciences Products
Purity
≥98%
Appearance
Crystalline Solid
IUPACName
N-[5-[1-[4-(4-acetylpiperazin-1-yl)cyclohexyl]-4-aminopyrazolo[3,4-d]pyrimidin-3-yl]-2-phenoxyphenyl]prop-2-enamide
Synonyms
EX-A2880; N-[5-[1-[4-(4-Acetylpiperazin-1-yl)cyclohexyl]-4-aminopyrazolo[3,4-d]pyrimidin-3-yl]-2-phenoxyphenyl]prop-2-enamide
InChI Key
FYICDSWKKFSYOM-UHFFFAOYSA-N
InChI
InChI=1S/C32H36N8O3/c1-3-28(42)36-26-19-22(9-14-27(26)43-25-7-5-4-6-8-25)30-29-31(33)34-20-35-32(29)40(37-30)24-12-10-23(11-13-24)39-17-15-38(16-18-39)21(2)41/h3-9,14,19-20,23-24H,1,10-13,15-18H2,2H3,(H,36,42)(H2,33,34,35)
SMILES
CC(=O)N1CCN(CC1)C2CCC(CC2)N3C4=NC=NC(=C4C(=N3)C5=CC(=C(C=C5)OC6=CC=CC=C6)NC(=O)C=C)N
Mechanism

Mechanism of Action: TX1-85-1 is a covalent HER3-binding probe suitable for customers exploring HER3-directed degradation concepts. By engaging the HER3 pseudokinase domain, it can support target-recognition, covalent ligand validation, and scaffold optimization for molecules intended to reduce HER3 protein abundance.

Applications

• PROTAC-Mediated Target Degradation: TX1-85-1 can be used as a ligand component in PROTAC designs to recruit an E3 ligase and drive ubiquitin-dependent degradation of a chosen target protein. This enables systematic evaluation of degrader potency, selectivity, and degradation kinetics across cellular models, supporting mechanism-of-action studies and target validation.

• E3 Ligase Recruitment Optimization: Incorporating TX1-85-1 into PROTAC scaffolds allows researchers to tune linker length, attachment position, and overall physicochemical properties to improve ternary complex formation. By comparing degradation profiles and residence-time proxies, investigators can identify configurations that maximize target ubiquitination efficiency and reduce off-target degradation.

• Structure-Guided PROTAC Design: TX1-85-1 can serve as a starting ligand for structure-informed PROTAC engineering, including rational placement of conjugation sites and iterative refinement of binding geometry. Such approaches support mapping of key contact residues, prediction of ternary complex stability, and development of degraders with enhanced potency and improved degradation specificity.

• Proteome-Wide Degradation Profiling: PROTACs built with TX1-85-1 can be applied to study degradation outcomes beyond the primary target using proteomics workflows. Quantifying changes in protein abundance helps determine degradation selectivity, uncover compensatory pathways, and assess whether the ligand architecture promotes broader or highly focused proteome remodeling.

1. Pharmacological targeting of the pseudokinase Her3
Ting Xie, Pasi A Jänne, Craig M Crews, Nathanael S Gray, Jarrod A Marto, Deepak Gurbani, Dalia Ercan, Hyun Seop Tae, Scott B Ficarro, Durga Udayakumar, Kenneth D Westover, Taebo Sim, Michael E Dodge, Steven M Riddle, Sang Min Lim Nat Chem Biol . 2014 Dec;10(12):1006-12. doi: 10.1038/nchembio.1658.
Her3 (also known as ErbB3) belongs to the epidermal growth factor receptor tyrosine kinases and is well credentialed as an anti-cancer target but is thought to be 'undruggable' using ATP-competitive small molecules because it lacks appreciable kinase activity. Here we report what is to our knowledge the first selective Her3 ligand, TX1-85-1, that forms a covalent bond with Cys721 located in the ATP-binding site of Her3. We demonstrate that covalent modification of Her3 inhibits Her3 signaling but not proliferation in some Her3-dependent cancer cell lines. Subsequent derivatization with a hydrophobic adamantane moiety demonstrates that the resultant bivalent ligand (TX2-121-1) enhances inhibition of Her3-dependent signaling. Treatment of cells with TX2-121-1 results in partial degradation of Her3 and serendipitously interferes with productive heterodimerization between Her3 with either Her2 or c-Met. These results suggest that small molecules will be capable of perturbing the biological function of Her3 and ~60 other pseudokinases found in human cells.
2. The significance of ErbB2/3 in the conversion of induced pluripotent stem cells into cancer stem cells
Masaharu Seno, Maram H Zahra, Ghmkin Hassan, Akimasa Seno Sci Rep . 2022 Feb 17;12(1):2711. doi: 10.1038/s41598-022-04980-y.
Cancer stem cells (CSCs) are suggested to be responsible for drug resistance and aggressive phenotypes of tumors. Mechanisms of CSC induction are still under investigation. Our lab has established a novel method to generate CSCs from iPSCs under a cancerous microenvironment mimicked by the conditioned medium (CM) of cancer-derived cells. Here, we analyzed the transcriptome of CSCs, which were converted from iPSCs with CM from pancreatic ductal adenocarcinoma cells. The differentially expressed genes were identified and used to explore pathway enrichment. From the comparison of the CSCs with iPSCs, genes with elevated expression were related to the ErbB2/3 signaling pathway. Inhibition of either ErbB2 with lapatinib as a tyrosine kinase inhibitor or ErbB3 with TX1-85-1 or siRNAs arrested cell proliferation, inhibited the in vitro tumorigenicity, and lead to loss of stemness in the converting cells. The self-renewal and tube formation abilities of cells were also abolished while CD24 and Oct3/4 levels were reduced, and the MAPK pathway was overactivated. This study shows a potential involvement of the ErbB2/ErbB3 pathway in CSC generation and could lead to new insight into the mechanism of tumorigenesis and the way of cancer prevention.
3. Development of small molecules targeting the pseudokinase Her3
Pasi A Jänne, Craig M Crews, Nathanael S Gray, Jarrod A Marto, Deepak Gurbani, Scott B Ficarro, Hyun Seop Tae, Kenneth D Westover, Taebo Sim, Sang Min Lim, Ting Xie Bioorg Med Chem Lett . 2015 Aug 15;25(16):3382-9. doi: 10.1016/j.bmcl.2015.04.103.
Her3 is a member of the human epidermal growth factor receptor (EGFR) tyrosine kinase family, and it is often either overexpressed or deregulated in many types of human cancer. Her3 has not been the subject of small-molecule inhibitor development because it is a pseudokinase and does not possess appreciable kinase activity. We recently reported on the development of the first selective irreversible Her3 ligand (TX1-85-1) that forms a covalent bond with cysteine 721 which is unique to Her3 among all kinases. We also developed a bi-functional compound (TX2-121-1) containing a hydrophobic adamantane moiety and the same warhead of TX1-85-1 that is capable of inhibiting Her3-dependent signaling and growth. Here we report on the structure-based medicinal chemistry effort that resulted in the discovery of these two compounds.

Structure: The structure of TX1-85-1 is characterized by primary or secondary amine/basic nitrogen centers; amide/urea/sulfonamide hydrogen-bonding motifs; heteroaromatic protein-recognition scaffold. These features provide defined hydrogen-bonding, hydrophobic, and steric elements that can support affinity retention while enabling analogue-based linker-vector selection.

Reactivity: The amine/basic nitrogen-containing motif can be evaluated for acylation, sulfonylation, alkylation, or carbamate/urea linker installation when that vector is solvent exposed. For PROTAC construction, the POI ligand can be paired with CRBN ligands such as thalidomide, pomalidomide, or lenalidomide analogues, VHL ligands such as VH032 derivatives, or less common IAP/MDM2/cIAP-recruiting ligands, with alkyl, PEG, piperazine, triazole, or amide linkers screened for ternary-complex formation. In practice, incorporation into PROTACs should begin from derivatives that preserve the reported binding pharmacophore, followed by systematic variation of linker length, polarity, rigidity, and exit-vector geometry to optimize target engagement, E3 recruitment, and cellular degradation readouts.

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Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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