Aminooxy-PEG3-methyl ester - CAS 2086689-03-2

Aminooxy-PEG3-methyl ester is a polyethylene glycol (PEG)-based PROTAC linker. Aminooxy-PEG3-methyl ester can be used in the synthesis of a series of PROTACs.

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Molecular Formula
C₁₀H₂₁NO₆
Molecular Weight
251.28

Aminooxy-PEG3-methyl ester

    • Specification
      • Storage
        Please store the product under the recommended conditions in the Certificate of Analysis.
        Shipping
        Room temperature in continental US; may vary elsewhere.
        IUPAC Name
        methyl 3-[2-[2-(2-aminooxyethoxy)ethoxy]ethoxy]propanoate
    • Properties
      • InChI Key
        KYJYDNKATOCUIR-UHFFFAOYSA-N
        InChI
        InChI=1S/C10H21NO6/c1-13-10(12)2-3-14-4-5-15-6-7-16-8-9-17-11/h2-9,11H2,1H3
        Canonical SMILES
        COC(=O)CCOCCOCCOCCON
    • Reference Reading
      • 1. Preparation of methyl ester precursors of biologically active agents
        Yunfan Zou, Marcela Rojas-Pierce, Natasha Raikhel, Michael Pirrung Biotechniques. 2008 Mar;44(3):377-84.doi: 10.2144/000112704.
        This method enables scientists to easily convert biologically active carboxylic acids into their methyl esters ("pro-drugs" generally having improved ability to penetrate cell membranes) using only equipment commonly found in a biology laboratory. An ion-exchange resin is used to convert the acid into its salt, which is thereby sequestered on the resin. The addition of methyl iodide converts the salt to the ester, which has no affinity for the resin and is readily eluted. Evaporation of the liquid phase provides the pure methyl ester. The preparation in good chemical yields of methyl esters of bioactive agents in excellent purity and 10-20 mg quantities can be achieved using this method. The method can be completed in 1 day.
        2. Systematic evaluation of methyl ester bioisosteres in the context of developing alkenyldiarylmethanes (ADAMs) as non-nucleoside reverse transcriptase inhibitors (NNRTIs) for anti-HIV-1 chemotherapy
        Ayako Hoshi, Takeshi Sakamoto, Jun Takayama, Meiyan Xuan, Mari Okazaki, Tracy L Hartman, Robert W Buckheit Jr, Christophe Pannecouque, Mark Cushman Bioorg Med Chem. 2016 Jul 1;24(13):3006-3022.doi: 10.1016/j.bmc.2016.05.010.Epub 2016 May 24.
        The alkenyldiarylmethanes (ADAMs) are a class of non-nucleoside reverse transcriptase inhibitors (NNRTIs) targeting HIV-1. Four chemically and metabolically stabilized ADAMs incorporating N-methoxyimidoyl halide replacements of the methyl esters of the lead compound were previously reported. In this study, twenty-five new ADAMs were synthesized in order to investigate the biological consequences of installing nine different methyl ester bioisosteres at three different locations. Attempts to define a universal rank order of methyl ester bioisosteres and discover the 'best' one in terms of inhibitory activity versus HIV-1 reverse transcriptase (RT) led to the realization that the potencies are critically dependent on the surrounding structure at each location, and therefore the definition of universal rank order is impossible. This investigation produced several new non-nucleoside reverse transcriptase inhibitors in which all three of the three methyl esters of the lead compound were replaced by methyl ester bioisosteres, resulting in compounds that are more potent as HIV-1 RT inhibitors and antiviral agents than the lead compound itself and are expected to also be more metabolically stable than the lead compound.
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