BETd-246

 CAS No.: 2140289-17-2  Cat No.: BP-400052 4.5  

BETd-246 is a second-generation BET bromodomain PROTAC degrader that connects a BET-recognition ligand to a cereblon-recruiting ligand. Public sources describe it as a potent and selective PROTAC-based BET bromodomain degrader with cellular antitumor research activity. The BET-binding element engages acetyl-lysine reader bromodomains within BET-family proteins, while the cereblon-binding element recruits the CRL4-cereblon ubiquitin-ligase complex. In PROTAC design, BETd-246 functions as a heterobifunctional molecule that converts BET bromodomain engagement into proximity-induced ubiquitination. Mechanistically, it promotes ternary-complex formation between BET proteins and cereblon, enabling proteasomal degradation and suppression of BET-dependent transcriptional programs. It is useful for studying BET protein dependency, BRD-driven gene regulation, cereblon-mediated degradation, degrader selectivity, and comparative cellular responses to BET inhibition versus BET protein depletion.

BETd-246

Structure of 2140289-17-2

Quality
Assurance

Worldwide
Delivery

24/7 Customer
Support
Category
PROTAC
Molecular Formula
C48H55N11O10
Molecular Weight
946.02

* For research and manufacturing use only. Not for human or clinical use.

SizePriceStockQuantity
-- $-- In stock

Looking for different specifications? Click to request a custom quote!

Capabilities & Facilities

  • Comprehensive PROTAC Platform
  • Scientific Expertise & Technical Support
  • Custom Synthesis & Design Service
  • Extensive Product Coverage
  • Cutting-Edge Innovation
  • Fast Delivery & Global Support
  • 24/7 customer service
  • 100% quality assurance
Popular Publications Citing BOC Sciences Products
Solubility
DMSO : 200 mg/mL (ultrasonic)
Storage
-20°C, stored under nitrogen<br/>*In solvent : -80°C, 6 months; -20°C, 1 month (stored under nitrogen)
Shipping
Room temperature in continental US; may vary elsewhere
Synonyms
BETd-246; BETd 246; BETd246; 4-[(5-cyclopropyl-2-ethylpyrazol-3-yl)amino]-7-(3,5-dimethyl-1,2-oxazol-4-yl)-N-[3-[2-[2-[3-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]propoxy]ethoxy]ethoxy]propyl]-6-methoxy-9H-pyrimido[4,5-b]indole-2-carboxamide
InChI Key
XEJMFVWHCPNMRS-UHFFFAOYSA-N
InChI
InChI=1S/C48H55N11O10/c1-5-58-37(25-33(56-58)28-11-12-28)52-43-41-30-24-36(65-4)31(39-26(2)57-69-27(39)3)23-34(30)51-42(41)54-44(55-43)46(62)50-16-8-18-67-20-22-68-21-19-66-17-7-15-49-32-10-6-9-29-40(32)48(64)59(47(29)63)35-13-14-38(60)53-45(35)61/h6,9-10,23-25,28,35,49H,5,7-8,11-22H2,1-4H3,(H,50,62)(H,53,60,61)(H2,51,52,54,55)
SMILES
CCN1C(=CC(=N1)C2CC2)NC3=NC(=NC4=C3C5=CC(=C(C=C5N4)C6=C(ON=C6C)C)OC)C(=O)NCCCOCCOCCOCCCNC7=CC=CC8=C7C(=O)N(C8=O)C9CCC(=O)NC9=O
Mechanism

Target: Targets BET bromodomain proteins, especially BRD4, BRD3, and BRD2 for experimental targeted protein degradation studies.

Binding Site: Binds the BET bromodomain acetyl-lysine pocket and recruited E3 ligase ligand site to support productive ternary complex formation.

Mechanism of Action: BETd-246 is designed for use in PROTAC or targeted protein degradation experiments directed toward BET bromodomain proteins, especially BRD4, BRD3, and BRD2. The bifunctional molecule links a target-recognition element to cereblon, promoting proximity between the protein of interest and ubiquitination machinery. Productive ternary-complex formation can drive polyubiquitination and proteasome-dependent target depletion, allowing researchers to compare pharmacological inhibition with protein removal. It is suitable for evaluating degradation potency, kinetics, pathway selectivity, and downstream signaling consequences in engineered or disease-relevant cellular models.

Applications

• PROTAC-Mediated BET Degradation: BETd-246 is a potent PROTAC molecule designed to selectively degrade BET family proteins. Researchers can utilize it to investigate the role of BET proteins in transcriptional regulation and explore novel therapeutic strategies for diseases linked to dysregulated BET activity.

• Targeted Protein Degradation in Oncology: By employing BETd-246, scientists can study the impact of targeted degradation of BET proteins on cancer cell proliferation. This application aids in understanding the potential of PROTACs in disrupting oncogenic pathways and developing targeted cancer therapies.

• Mechanistic Studies of BET Inhibition: BETd-246 serves as a valuable tool for dissecting the mechanisms underlying BET protein inhibition. Researchers can leverage this PROTAC to elucidate the cellular consequences of BET degradation, advancing knowledge in epigenetic regulation and transcriptional control.

• Exploring PROTAC Efficacy: Utilizing BETd-246, investigators can assess the efficacy and selectivity of PROTAC technology in degrading target proteins. This application provides insights into optimizing PROTAC design for enhanced specificity and therapeutic potential in various research models.

1. Targeting bromodomain and extraterminal proteins in breast cancer
Jennifer M Sahni, Ruth A Keri Pharmacol Res. 2018 Mar;129:156-176.doi: 10.1016/j.phrs.2017.11.015.Epub 2017 Nov 16.
Breast cancer is a collection of distinct tumor subtypes that are driven by unique gene expression profiles. These transcriptomes are controlled by various epigenetic marks that dictate which genes are expressed and suppressed. During carcinogenesis, extensive restructuring of the epigenome occurs, including aberrant acetylation, alteration of methylation patterns, and accumulation of epigenetic readers at oncogenes. As epigenetic alterations are reversible, epigenome-modulating drugs could provide a mechanism to silence numerous oncogenes simultaneously. Here, we review the impact of inhibitors of the Bromodomain and Extraterminal (BET) family of epigenetic readers in breast cancer. These agents, including the prototypical BET inhibitor JQ1, have been shown to suppress a variety of oncogenic pathways while inducing minimal, if any, toxicity in models of several subtypes of breast cancer. BET inhibitors also synergize with multiple approved anti-cancer drugs, providing a greater response in breast cancer cell lines and mouse models than either single agent. The combined findings of the studies discussed here provide an excellent rationale for the continued investigation of the utility of BET inhibitors in breast cancer.
2. Targeted Degradation of BET Proteins in Triple-Negative Breast Cancer
Longchuan Bai, Bing Zhou, Chao-Yie Yang, Jiao Ji, Donna McEachern, Sally Przybranowski, Hui Jiang, Jiantao Hu, Fuming Xu, Yujun Zhao, Liu Liu, Ester Fernandez-Salas, Jing Xu, Yali Dou, Bo Wen, Duxin Sun, Jennifer Meagher, Jeanne Stuckey, Daniel F Hayes, Shunqiang Li, Matthew J Ellis, Shaomeng Wang0 Cancer Res. 2017 May 1;77(9):2476-2487.doi: 10.1158/0008-5472.CAN-16-2622.Epub 2017 Feb 16.
Triple-negative breast cancers (TNBC) remain clinically challenging with a lack of options for targeted therapy. In this study, we report the development of a second-generation BET protein degrader, BETd-246, which exhibits superior selectivity, potency, and antitumor activity. In human TNBC cells, BETd-246 induced degradation of BET proteins at low nanomolar concentrations within 1 hour of exposure, resulting in robust growth inhibition and apoptosis. BETd-246 was more potent and effective in TNBC cells than its parental BET inhibitor compound BETi-211. RNA-seq analysis revealed predominant downregulation of a large number of genes involved in proliferation and apoptosis in cells treated with BETd-246, as compared with BETi-211 treatment that upregulated and downregulated a similar number of genes. Functional investigations identified the MCL1 gene as a critical downstream effector for BET degraders, which synergized with small-molecule inhibitors of BCL-xL in triggering apoptosis. In multiple murine xenograft models of human breast cancer, BETd-246 and a further optimized analogue BETd-260 effectively depleted BET proteins in tumors and exhibited strong antitumor activities at well-tolerated dosing schedules. Overall, our findings show that targeting BET proteins for degradation represents an effective therapeutic strategy for TNBC treatment. Cancer Res; 77(9); 2476-87. ©2017 AACR.
3. Characterizing the Therapeutic Potential of a Potent BET Degrader in Merkel Cell Carcinoma
Jae Eun Choi, Monique E Verhaegen, Sahr Yazdani, et al. Neoplasia. 2019 Mar;21(3):322-330.doi: 10.1016/j.neo.2019.01.003.Epub 2019 Feb 21.
Studies on the efficacy of small molecule inhibitors in Merkel cell carcinoma (MCC) have been limited and largely inconclusive. In this study, we investigated the therapeutic potential of a potent BET degrader, BETd-246, in the treatment of MCC. We found that MCC cell lines were significantly more sensitive to BETd-246 than to BET inhibitor treatment. Therapeutic targeting of BET proteins resulted in a loss of "MCC signature" genes but not MYC expression as previously described irrespective of Merkel cell polyomavirus (MCPyV) status. In MCPyV+ MCC cells, BETd-246 alone suppressed downstream targets in the MCPyV-LT Ag axis. We also found enrichment of HOX and cell cycle genes in MCPyV- MCC cell lines that were intrinsically resistant to BETd-246. Our findings uncover a requirement for BET proteins in maintaining MCC lineage identity and point to the potential utility of BET degraders for treating MCC.

Stock concentration: *
Desired final volume: *
Desired concentration: *

L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

Related Product Recommendations

BOC Sciences Support

Please contact us with any specific requirements and we will get back to you as soon as possible.


  • Verification code

We invite you to contact us at or through our contact form above for more information about our services and products.

USA
  • International:
  • US & Canada (Toll free):
  • Email:
  • Fax:
Germany
Inquiry Basket