(S,R,S)-AHPC-PEG5-COOH

 CAS No.: 2172820-14-1  Cat No.: BP-100099 4.5  

(S,R,S)-AHPC-PEG5-COOH is a premium E3 Ligase Ligand-Linker Conjugate designed for advanced PROTAC (Proteolysis Targeting Chimera) drug discovery applications. This compound features the high-affinity AHPC-based ligand, which selectively binds the von Hippel-Lindau (VHL) E3 ligase, covalently linked via a five-unit polyethylene glycol (PEG5) spacer to a carboxylic acid functional group. The PEG5 linker enhances solubility and optimizes spatial orientation in bifunctional PROTACs, facilitating efficient ubiquitination and proteasomal degradation of target proteins. As a critical building block in PROTAC design, (S,R,S)-AHPC-PEG5-COOH enables researchers to conjugate various target protein ligands, expediting the development and optimization of next-generation degraders for a wide range of disease-related proteins. Its versatile chemistry and proven compatibility with structure-based design make it an ideal choice for innovators in the fields of targeted protein degradation, oncology, epigenetics, and neurodegenerative disease research. Unlock the potential of your PROTAC platform strategies with (S,R,S)-AHPC-PEG5-COOH—engineered for reliable, reproducible, and potent results.

(S,R,S)-AHPC-PEG5-COOH

Structure of 2172820-14-1

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Category
E3 Ligase Ligand-Linker Conjugate
Molecular Formula
C₃₆H₅₄N₄O₁₁S
Molecular Weight
750.90

* For research and manufacturing use only. Not for human or clinical use.

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  • Comprehensive PROTAC Platform
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Solubility
In DMSO: ≥ 100 mg/mL (133.17 mM)<br/>* "≥" means soluble, but saturation unknown.
Storage
-20°C, stored under nitrogen; In solvent, -80°C, 6 months; -20°C, 1 month (stored under nitrogen)
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
3-[2-[2-[2-[2-[3-[[(2S)-1-[(2S,4R)-4-hydroxy-2-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methylcarbamoyl]pyrrolidin-1-yl]-3,3-dimethyl-1-oxobutan-2-yl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid
Synonyms
Cereblon Ligand-Linker Conjugates 13; E3 ligase Ligand-Linker Conjugates 50
InChI Key
YDOJYEPMGKGKQV-ZLWRCJDJSA-N
InChI
1S/C36H54N4O11S/c1-25-32(52-24-38-25)27-7-5-26(6-8-27)22-37-34(45)29-21-28(41)23-40(29)35(46)33(36(2,3)4)39-30(42)9-11-47-13-15-49-17-19-51-20-18-50-16-14-48-12-10-31(43)44/h5-8,24,28-29,33,41H,9-23H2,1-4H3,(H,37,45)(H,39,42)(H,43,44)/t28-,29+,33-/m1/s1
Canonical SMILES
CC1=C(C2=CC=C(C=C2)CNC([C@@H]3C[C@H](CN3C([C@H](C(C)(C)C)NC(CCOCCOCCOCCOCCOCCC(O)=O)=O)=O)O)=O)SC=N1
Pub Chem ID
134184001

Background Introduction

(S,R,S)-AHPC-PEG5-COOH is a specialized E3 ligase ligand-linker conjugate commonly used in the design and synthesis of Proteolysis Targeting Chimeras (PROTACs). This compound seamlessly bridges the von Hippel-Lindau (VHL) E3 ligase ligand (derived from AHPC) with a customizable linker (PEG5) and a terminal carboxylic acid, enabling high flexibility for conjugation with target protein ligands in next-generation drug discovery.

Mechanism

As a bifunctional molecule, (S,R,S)-AHPC-PEG5-COOH facilitates targeted protein degradation through the PROTAC technology platform. The AHPC moiety selectively binds the VHL E3 ubiquitin ligase complex, while the PEG5 spacer provides optimal distance, solubility, and flexibility. The terminal COOH group enables straightforward coupling with a ligand for the protein of interest. When used in a full PROTAC construct, it brings the E3 ligase into proximity with the target protein, promoting ubiquitination and subsequent proteasomal degradation.

Applications

(S,R,S)-AHPC-PEG5-COOH is widely employed in the development of PROTACs for targeted protein degradation research, lead discovery, and validation studies. This reagent is essential in oncology, neurodegeneration, and immunology projects, where selective removal of disease-relevant proteins is desired. Its ready-to-use functionality accelerates the exploration of novel degraders in both academic and pharmaceutical research, making it a crucial tool for custom PROTAC synthesis, structure-activity relationship (SAR) studies, and therapeutic development.

• Long PEG5 linker increases PROTAC solubility and cellular permeability, optimizing drug-like properties.
• Carboxyl functional group enables versatile conjugation with diverse warheads for efficient VHL-based PROTAC assembly.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g
Historical Records: Thalidomide-O-amido-PEG-C2-NH2

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