1,3,4,6-Tetra-O-acetyl-N-azidoacetylmannosamine

 CAS No.: 361154-30-5  Cat No.: BP-500038  Purity: 98% 4.5  

1,3,4,6-Tetra-O-acetyl-N-azidoacetylmannosamine is a protected, azide-functionalized monosaccharide derivative in which the hydroxyl groups are masked as acetates and the amino functionality is acylated with an azidoacetyl group. Structurally, it provides a compact, cell-compatible handle for bioorthogonal conjugation: the azide moiety can participate in azide–alkyne cycloaddition or related click-type chemistries, while the O-acetyl groups enhance membrane permeability and can be removed intracellularly by esterase activity to regenerate more reactive sugar functionalities. In PROTAC and targeted degradation research, such azide-bearing sugar motifs are valuable for installing or exchanging linkers that connect a targeting ligand (e.g., binder for an E3 ligase or target-associated module) to a degradation-driving scaffold through orthogonal coupling. This enables modular synthesis of degradation constructs, facilitates attachment of probes for localization studies, and supports systematic optimization of linker geometry and conjugation efficiency in mechanistic experiments.

1,3,4,6-Tetra-O-acetyl-N-azidoacetylmannosamine

Structure of 361154-30-5

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PROTAC Linker
Molecular Formula
C16H22N4O10
Molecular Weight
430.37
Appearance
White powder

* For research and manufacturing use only. Not for human or clinical use.

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Popular Publications Citing BOC Sciences Products
Purity
98%
Solubility
Soluble in DMSO (100 mg/mL, 232.36 mM, Need ultrasonic)
Appearance
White powder
Storage
Powder, -20°C, 3 years; In solvent, -80°C, 6 months; -20°C, 1 month
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
[(2R,3S,4R,5S)-3,4,6-triacetyloxy-5-[(2-azidoacetyl)amino]oxan-2-yl]methyl acetate
Synonyms
BP-23389; BP-23431
InChI Key
HGMISDAXLUIXKM-LIADDWGISA-N
InChI
InChI=1S/C16H22N4O10/c1-7(21)26-6-11-14(27-8(2)22)15(28-9(3)23)13(16(30-11)29-10(4)24)19-12(25)5-18-20-17/h11,13-16H,5-6H2,1-4H3,(H,19,25)/t11-,13+,14-,15-,16?/m1/s1
SMILES
CC(=O)OCC1C(C(C(C(O1)OC(=O)C)NC(=O)CN=[N+]=[N-])OC(=O)C)OC(=O)C
1. 1,3,4-Thiadiazole Scaffold: As Anti-Epileptic Agents
Tulika Anthwal, Sumitra Nain Front Chem. 2022 Jan 21;9:671212. doi: 10.3389/fchem.2021.671212.eCollection 2021.
A wide range of biological activities is exhibited by 1,3,4-thiadiazole moiety such as antidiabetic, anticancer, anti-inflammatory, anticonvulsant, antiviral, antihypertensive, and antimicrobial. To date, drugs such as butazolamide, and acetazolamide. Several modifications have been done in the 1,3,4-thiadiazole moiety which showed good potency as anticonvulsant agents which are highly effective and have less toxicity. After in-depth literature survey in this review, we have compiled various derivatives of 1,3,4-thiadiazole scaffold as anticonvulsant agents.
2. Synthesis of (2-chloroquinolin-3-yl)-1,3,4-thiadiazole-2-carboxamides
A N Aksenov, M M Krayushkin, V N Yarovenko Russ Chem Bull. 2021;70(6):1131-1134. doi: 10.1007/s11172-021-3194-3.Epub 2021 Jul 14.
(2-Chloroquinolin-3-yl)-1,3,4-thiadiazole-2-carboxamides were synthesized from hydrazones obtained via the reaction of 3-formyl-2-chloroquinoline with oxamic acid thiohydrazides.
3. 1,3,4-oxadiazole derivatives as potential antimicrobial agents
Deeksha Tiwari, Rakesh Narang, Kalvatala Sudhakar, Vikramjeet Singh, Sukhbir Lal, Manish Devgun Chem Biol Drug Des. 2022 Dec;100(6):1086-1121. doi: 10.1111/cbdd.14100.Epub 2022 Jun 27.
Due to the emergence of drug-resistant microbial strains, different research groups are continuously developing novel drug molecules against already exploited and unexploited targets. 1,3,4-Oxadiazole derivatives exhibited noteworthy antimicrobial activities. The presence of 1,3,4-oxadiazole moiety in antimicrobial agents can modify their polarity and flexibility, which significantly improves biological activities due to various bonded and non-bonded interactions viz. hydrogen bond, steric, electrostatic, and hydrophobic with target sites. The present review elaborates the therapeutic targets and mode of interaction of 1,3,4-oxadiazoles as antimicrobial agents. 1,3,4-oxadiazole derivatives target enoyl reductase (InhA), 14α-demethylase in the mycobacterial cell; GlcN-6-P synthase, thymidylate synthase, peptide deformylase, RNA polymerase, dehydrosqualene synthase in bacterial strains; ergosterol biosynthesis pathway, P450-14α demethylase, protein-N-myristoyltransferase in fungal strains; FtsZ protein, interfere with purine and functional protein synthesis in plant bacteria. The present review also summarizes the effect of different moieties and functional groups on the antimicrobial activity of 1,3,4-oxadiazole derivatives.
ConcentrationVolumeMass1 mg5 mg10 mg
1 mM2.3236 mL11.6179 mL23.2358 mL
5 mM0.4647 mL2.3236 mL4.6472 mL
10 mM0.2324 mL1.1618 mL2.3236 mL

This PROTAC linker is a protected, azide-functional building block designed to enable efficient assembly of heterobifunctional degraders through click-compatible conjugation strategies. Its acetylated sugar framework provides a compact scaffold that can be deprotected or further functionalized as needed, while the azide handle supports bioorthogonal coupling to target-binding and E3-recruiting ligands. The molecule’s defined reactivity profile helps researchers streamline linker installation and optimize conjugation workflows; detailed structural and reaction considerations follow below.

Structure: The linker is a tetra-O-acetylated mannosamine derivative bearing an azidoacetyl substituent. It contains ester linkages from acetyl groups, an azide functional group, and amide connectivity, contributing to moderate polarity and stability under typical organic synthesis conditions.

Reactivity: The azide group is suitable for copper-catalyzed azide–alkyne cycloaddition or strain-promoted azide–alkene cycloaddition to form stable triazole linkages in PROTAC constructs. Conjugation is commonly performed in polar aprotic solvents under conditions that preserve ester groups, with catalyst choice and ligand compatibility guiding reaction efficiency and minimizing side reactions.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
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