Aminooxy-PEG8-methane HCl salt is a methoxy-terminated aminooxy PEG reagent supplied as a hydrochloride salt. Structurally, it contains an aminooxy group at one end of a PEG8 chain and a nonreactive methoxy cap at the other, with chloride serving only as the counterion. After appropriate neutralization, the aminooxy group reacts with aldehydes or ketones to form oxime linkages, while the methoxy terminus remains chemically capped. In PROTAC and related targeted protein degradation research, the reagent can attach a long hydrophilic PEG–methoxy segment to a carbonyl-bearing ligand or probe without introducing a second covalent reaction site. Its defined architecture allows researchers to evaluate how linker polarity, flexibility, attachment sequence, and terminal-group selection influence conjugate preparation and the spatial requirements of productive target–E3 ligase engagement.
Structure of 2055024-52-5
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Aminooxy-PEG8-methane HCl salt is a PEG-based, aminooxy-functional linker designed to support efficient conjugation in PROTAC construction. Its aminooxy handle enables chemoselective oxime formation with carbonyl-bearing ligands, while the PEG spacer helps tune solubility and presentation of the recruited warhead and E3-binding moieties. The following sections describe the structure and the practical reactivity considerations for assembling PROTACs using this linker.
Structure: The linker comprises a polyethylene glycol spacer terminating in an aminooxy group, provided as a hydrochloride salt. It contains ether linkages characteristic of PEG, plus an aminooxy functionality capable of forming oxime linkages. The salt form improves handling and water compatibility for bioconjugation workflows.
Reactivity: Aminooxy groups react with aldehydes or ketones to form oximes under mildly basic conditions, typically using buffered aqueous mixtures compatible with sensitive ligands. The process proceeds via nucleophilic addition of the aminooxy to the carbonyl followed by dehydration to yield a stable oxime bond. No metal catalysts are generally required; careful control of pH and reagent stoichiometry is important to suppress side reactions and maximize coupling efficiency.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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