Azido-PEG4-4-nitrophenyl carbonate
Azido-PEG4-4-nitrophenyl carbonate is a heterobifunctional PEG-based linker designed for PROTAC and related targeted protein degradation platforms. Structurally, it comprises a short four-unit polyethylene glycol spacer terminated with an azide group and an activated 4-nitrophenyl carbonate leaving group, enabling selective conjugation chemistry while maintaining colloidal compatibility and controlled linker flexibility. In PROTAC construction, the azide handle can be used for bioorthogonal attachment (for example, via copper-free azide–alkyne cycloaddition or other azide-reactive coupling strategies), allowing installation of one binding element such as a ligand for an E3 ligase or the target protein. In parallel, the nitrophenyl carbonate moiety provides an activated carbamate-forming functionality that can react with nucleophilic amines to generate stable linker–ligand conjugates. This product is valuable for researchers seeking modular, tunable PEG spacing and orthogonal conjugation steps to rapidly assemble and optimize degraders with improved synthesis efficiency and reliable linker integrity.
Structure of 1422540-98-4
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* For research and manufacturing use only. Not for human or clinical use.
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Azido-PEG4-4-nitrophenyl carbonate is a PEG-based bifunctional linker designed for building PROTACs through orthogonal conjugation and efficient amide/urethane-forming chemistry. Its azide handle enables versatile click-type bioconjugation strategies, while the activated carbonate supports coupling to nucleophilic groups under mild conditions. This combination facilitates modular assembly of targeted protein degraders, improving synthetic flexibility and supporting structure–function optimization. Detailed structural and reactivity considerations are provided below.
Structure: The linker comprises a poly(ethylene glycol) chain terminating in an azide functionality and an activated carbonate connected to a 4-nitrophenyl leaving group. It contains ether linkages characteristic of PEG, an azide moiety, and a carbonate ester with an aromatic nitro substituent that enhances leaving-group ability.
Reactivity: The 4-nitrophenyl carbonate portion reacts with suitable nucleophiles (commonly amines or other nucleophiles) via acyl substitution, releasing 4-nitrophenol. Couplings are typically performed under controlled, anhydrous or low-water conditions using polar aprotic solvents and base systems compatible with azide stability. The azide is then preserved for subsequent strain-promoted or copper-catalyzed azide–alkyne cycloaddition steps to install the second PROTAC module.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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