β-Estradiol-6-one 6-(O-carboxymethyloxime) is a steroidal PROTAC linker-building block derived from β-estradiol, bearing an oxime functionality at the 6-position and an O-carboxymethyl substituent that provides a chemically addressable handle for further conjugation. Structurally, it retains the estrogen core while introducing an oxime ether that can be used to tune polarity, solubility, and the spatial presentation of the attachment point relative to the steroid scaffold. In PROTAC design, such estrogen-derived motifs are commonly employed as E3 ligase–recruiting elements (or as precursors to them), and the carboxymethyloxime enables controlled linkage chemistry to connect the E3-binding region with a second ligand (e.g., a target-binding warhead) through stable amide or related coupling strategies. This compound is valuable for researchers developing targeted protein degradation constructs that require a steroid-based recognition element and a linker region capable of supporting systematic structure–activity relationship studies.
Structure of 35048-47-6
* For research and manufacturing use only. Not for human or clinical use.
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This PROTAC linker is designed to enable robust formation of oxime-based connections between targeting ligands and downstream conjugation partners, supporting controlled assembly of targeted protein degraders. Its oxime functionality offers chemical handle(s) that can be leveraged in linker-ligand coupling workflows, facilitating modular PROTAC design. The ensuing sections describe the linker’s structural features and practical considerations for PROTAC construction in experimental settings.
Structure: The linker contains an oxime moiety bearing an O-carboxymethyloxime substituent, providing an oxygen-rich functional group for conjugation chemistry. It incorporates an ester-like carboxymethyl fragment and multiple heteroatoms that can engage in hydrogen bonding, influencing polarity and solubility behavior in common organic media.
Reactivity: Oxime-derived linkers are typically incorporated via oxime formation or oxime-based coupling strategies, where electrophilic activation of the carboxymethyl group (or complementary functional groups on partner ligands) enables amide or ester bond formation. Suitable conditions often involve mild base or coupling reagents compatible with oxime stability, with polar aprotic solvents commonly used to promote solvation and reaction efficiency. Reaction design should account for maintaining oxime integrity and minimizing side reactions such as hydrolysis under aqueous or strongly acidic conditions.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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