Lenalidomide-d5

 CAS No.: 1227162-34-6  Cat No.: BP-200076  Purity: 95% by HPLC; 95% atom D 4.5  

Lenalidomide-d5 is a deuterated analog of lenalidomide, engineered with five deuterium atoms for use as a stable isotope-labeled E3 ligase ligand. This compound is frequently utilized in PROTAC drug discovery for creating cereblon (CRBN)-recruiting degraders, enabling advanced research in targeted protein degradation. The deuterated structure ensures enhanced mass spectrometric tracking and quantification, making Lenalidomide-d5 an excellent choice for pharmacokinetic studies, bioanalytical research, and as a reference standard. Category: E3 Ligase Ligand, Stable Isotope Labeled. Ideal for applications in molecular glue and PROTAC-based therapeutic development.

Lenalidomide-d5

Structure of 1227162-34-6

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Category
Ligand for E3 Ligase
Molecular Formula
C13H8D5N3O3
Molecular Weight
264.29

* For research and manufacturing use only. Not for human or clinical use.

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Popular Publications Citing BOC Sciences Products
Purity
95% by HPLC; 95% atom D
Solubility
DMSO: soluble; Methanol: soluble
Storage
Store at -20°C
IUPACName
3-(7-amino-3-oxo-1H-isoindol-2-yl)-3,4,4,5,5-pentadeuteriopiperidine-2,6-dione
Synonyms
Lenalidomide D5
Boiling Point
614.0±55.0 °C at 760 mmHg
Density
1.5±0.1 g/cm3
InChI Key
GOTYRUGSSMKFNF-QTQWIGFBSA-N
InChI
InChI=1S/C13H13N3O3/c14-9-3-1-2-7-8(9)6-16(13(7)19)10-4-5-11(17)15-12(10)18/h1-3,10H,4-6,14H2,(H,15,17,18)/i4D2,5D2,10D
Canonical SMILES
C1CC(=O)NC(=O)C1N2CC3=C(C2=O)C=CC=C3N

Background Introduction

Lenalidomide-d5 is a deuterated analog of Lenalidomide, a prominent immunomodulatory imide drug (IMiD) that serves as an efficient ligand for the Cereblon (CRBN) E3 ubiquitin ligase complex. The substitution of five hydrogen atoms with deuterium enhances the compound's metabolic stability and enables its application as a labeled probe in pharmacokinetics and mechanistic studies. Lenalidomide and its labeled derivatives are vital in the PROTAC (Proteolysis Targeting Chimera) field for targeted protein degradation.

Mechanism

Lenalidomide-d5 specifically binds to the CRBN E3 ubiquitin ligase, facilitating the recruitment of the CUL4-CRBN complex. When incorporated into PROTACs, this interaction brings the ligase complex into proximity with the target protein, promoting its ubiquitination and subsequent degradation by the proteasome. The deuterium labeling in Lenalidomide-d5 preserves its binding affinity and functional activity while enabling easy tracking via mass spectrometry or other analytical techniques during degrader development and pharmacokinetic assays.

Applications

Lenalidomide-d5 is primarily used in the development and validation of CRBN-based PROTACs and molecular glue degraders. Its deuterated structure makes it an ideal tool for:

• Investigating the pharmacokinetics and metabolic fate of Lenalidomide-based PROTACs
• Utilizing as an internal standard in quantitative bioanalytical studies by LC-MS/MS
• Designing stable isotope-labeled probes for mechanistic and in vivo studies of targeted protein degradation
• Supporting structure-activity relationship (SAR) research and optimization of novel E3 ligase recruiters for drug discovery and preclinical research.
• High-purity compound verified by HPLC, NMR, and LC-MS
• Consistent batch-to-batch reproducibility with complete QC documentation
• Supplied with COA, MSDS, and analytical data for traceability
• Reliable global shipping with stability-guaranteed packaging
• Dedicated technical support and optional custom synthesis service
• Demonstrates strong binding affinity to CRBN, VHL, or other E3 ligases
• Enables stable E3 ligase recruitment for targeted protein degradation
• Deuterium labeling enables precise quantitative analysis in drug metabolism and pharmacokinetics studies.
• High affinity for cereblon (CRBN) E3 ligase makes it a reliable tool for developing stable and effective PROTAC molecules.
1. Lenalidomide in follicular lymphoma
Christopher R Flowers, Nathan H Fowler, John P Leonard Blood . 2020 Jun 11;135(24):2133-2136. doi: 10.1182/blood.2019001751.
Lenalidomide is an immunomodulatory drug approved in the United States for use with rituximab in patients with relapsed/refractory follicular lymphoma. We reviewed data from trials addressing the safety and efficacy of lenalidomide alone and in combination with rituximab as a first-line therapy and as a treatment of patients with relapsed/refractory follicular lymphoma. Lenalidomide-rituximab has been demonstrated to be an effective chemotherapy-free therapy that improves upon single-agent rituximab and may become an alternative to chemoimmunotherapy.
2. Genetics of progression from MDS to secondary leukemia
Matthew J Walter, Andrew J Menssen Blood . 2020 Jul 2;136(1):50-60. doi: 10.1182/blood.2019000942.
Our understanding of the genetics of acute myeloid leukemia (AML) development from myelodysplastic syndrome (MDS) has advanced significantly as a result of next-generation sequencing technology. Although differences in cell biology and maturation exist between MDS and AML secondary to MDS, these 2 diseases are genetically related. MDS and secondary AML cells harbor mutations in many of the same genes and functional categories, including chromatin modification, DNA methylation, RNA splicing, cohesin complex, transcription factors, cell signaling, and DNA damage, confirming that they are a disease continuum. Differences in the frequency of mutated genes in MDS and secondary AML indicate that the order of mutation acquisition is not random during progression. In almost every case, disease progression is associated with clonal evolution, typically defined by the expansion or emergence of a subclone with a unique set of mutations. Monitoring tumor burden and clonal evolution using sequencing provides advantages over using the blast count, which underestimates tumor burden, and could allow for early detection of disease progression prior to clinical deterioration. In this review, we outline advances in the study of MDS to secondary AML progression, with a focus on the genetics of progression, and discuss the advantages of incorporating molecular genetic data in the diagnosis, classification, and monitoring of MDS to secondary AML progression. Because sequencing is becoming routine in the clinic, ongoing research is needed to define the optimal assay to use in different clinical situations and how the data can be used to improve outcomes for patients with MDS and secondary AML.
3. Long-term outcomes from the Phase II L-MIND study of tafasitamab (MOR208) plus lenalidomide in patients with relapsed or refractory diffuse large B-cell lymphoma
Martin Dreyling, Zsolt Nagy, Gianluca Gaidano, Johannes Duell, Eva González-Barca, Aleš Obr, Tobias Menne, Anna Marina Liberati, Andreas Rosenwald, Wojciech Jurczak, Marc André, Olivier Tournilhac, Gilles Salles, Sumeet Ambarkhane, Nagesh Kalakonda, Sven De Vos, Maren Dirnberger-Hertweck, Marinela Augustin, Kami J Maddocks, Johannes Weirather, Pau Abrisqueta Haematologica . 2021 Sep 1;106(9):2417-2426. doi: 10.3324/haematol.2020.275958.
Tafasitamab (MOR208), an Fc-modified, humanized, anti-CD19 monoclonal antibody, combined with the immunomodulatory drug lenalidomide was clinically active with a good tolerability profile in the open-label, single-arm, phase II L-MIND study of patients with relapsed/refractory diffuse large B-cell lymphoma (DLBCL) ineligible for autologous stem-cell transplantation. To assess long-term outcomes, we report an updated analysis with ≥35 months' follow-up. Patients were aged >18 years, had received one to three prior systemic therapies (including ≥1 CD20-targeting regimen) and Eastern Cooperative Oncology Group performance status 0-2. Patients received 28-day cycles of tafasitamab (12 mg/kg intravenously), once weekly during cycles 1-3, then every 2 weeks during cycles 4-12. Lenalidomide (25 mg orally) was administered on days 1-21 of cycles 1-12. After cycle 12, progression-free patients received tafasitamab every 2 weeks until disease progression. The primary endpoint was best objective response rate. After ≥35 months' follow-up (data cut-off: October 30, 2020), the objective response rate was 57.5% (n=46/80), including a complete response in 40.0% of patients (n=32/80) and a partial response in 17.5% of patients (n=14/80). The median duration of response was 43.9 months (95% confidence interval [95% CI]: 26.1-not reached), the median overall survival was 33.5 months (95% CI: 18.3-not reached) and the median progression-free survival was 11.6 months (95% CI: 6.3-45.7). There were no unexpected toxicities. Subgroup analyses revealed consistent long-term efficacy results across most subgroups of patients. This extended follow-up of L-MIND confirms the long duration of response, meaningful overall survival, and well-defined safety profile of tafasitamab plus lenalidomide followed by tafasitamab monotherapy in patients with relapsed/refractory diffuse large B-cell lymphoma ineligible for autologous stem cell transplantation. ClinicalTrials.gov identifier:NCT02399085.

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