Mal-PEG4-Lys(t-Boc)-NH-m-PEG24
Mal-PEG4-Lys(t-Boc)-NH-m-PEG24 is a heterobifunctional polyethylene glycol–based linker designed for PROTAC assembly, featuring a maleimide “Mal” group for chemoselective conjugation to thiols and a lysine-derived amide core that provides a defined branching point for attaching additional PEG segments. The structure incorporates a short PEG4 spacer and a longer m-PEG24 segment, yielding an overall flexible, hydrophilic chain that can tune the effective distance and orientation between the two binding elements of a PROTAC. In targeted protein degradation workflows, the maleimide enables stable thioether linkage to cysteine-bearing ligands or engineered intermediates, while the PEG spacers help reduce steric clashes and improve solubility, thereby supporting productive formation of the ternary complex with the recruited target. This linker is valuable for researchers optimizing linker length, flexibility, and conjugation chemistry to enhance degradation potency and experimental robustness.
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* For research and manufacturing use only. Not for human or clinical use.
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This Mal-PEG4-Lys(t-Boc)-NH-m-PEG24 linker is designed for constructing PROTACs that require a flexible, hydrophilic spacer between a maleimide-reactive handle and a protected lysine-derived connection point. Its PEG-rich architecture promotes solubility and conformational adaptability, supporting efficient formation of ternary complexes. The maleimide functionality enables selective conjugation to thiol-containing ligands, while the protected amine facilitates controlled downstream coupling. The detailed structural and reactivity considerations are provided below.
Structure: The linker comprises a PEG-based, highly flexible polyether scaffold incorporating a maleimide moiety and a lysine-derived amide linkage bearing a tert-butoxycarbonyl-protected amine. It contains carbonyl groups within the maleimide and amide, with ether linkages throughout the PEG segments, supporting strong water compatibility.
Reactivity: PROTAC assembly using this linker typically relies on maleimide–thiol conjugation under mildly basic, aqueous-compatible conditions to form a stable thioether linkage via Michael addition. Thiol-containing targeting ligands are commonly prepared or generated in situ with appropriate reducing conditions and then reacted with the linker. The lysine t-Boc group is generally removed under acid-mediated deprotection to enable subsequent amide or urea coupling to the second component, using standard peptide-conjugation chemistries.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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