N-(2-Aminoethyl)maleimide trifluoroacetate salt is a bifunctional linker featuring a maleimide electrophile for selective conjugation to thiol-containing ligands (most commonly cysteine residues or thiol-functional small molecules) and a terminal primary amine that enables further coupling, derivatization, or attachment to PROTAC scaffolds. The maleimide–thiol Michael addition provides a robust, chemoselective handle for installing a degradation-binding moiety onto a protein-targeting or E3-recruiting component while the aminoethyl segment offers a controllable spacer to tune effective proximity and geometry. In PROTAC design, such linkers are used to connect two functional fragments in a defined manner, helping to position the recruiting ligand relative to the target-binding element to support ternary complex formation and subsequent ubiquitination-driven degradation. This salt form improves handling and solubility for experimental workflows, making it a practical reagent for constructing thiol-reactive PROTAC intermediates and for systematic linker optimization in targeted protein degradation studies.
Structure of 146474-00-2
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N-(2-Aminoethyl)maleimide trifluoroacetate salt, provides a maleimide handle for efficient thiol-directed conjugation and a primary amine for orthogonal functionalization. Its zwitterionic salt form improves handling and reproducibility in linker assembly workflows. The combination of reactive motifs supports modular PROTAC synthesis, enabling rapid attachment to cysteine-bearing ligands and subsequent coupling steps, as detailed below.
Structure: The linker contains a maleimide electrophile conjugated to a two-carbon aminoethyl spacer, paired with a primary amine functionality. It is supplied as a trifluoroacetate salt, featuring ionic interactions that enhance aqueous solubility. Key bonds include amide-linked connectivity and a cyclic alkene within the maleimide core.
Reactivity: Maleimide groups react selectively with thiols via Michael addition, forming stable thioether linkages under mildly basic to neutral aqueous conditions. Trifluoroacetate counterions generally support dissolution and controlled reactivity without requiring harsh reagents. For PROTAC construction, thiol-containing ligands or cysteine-derivatized intermediates are combined with the linker, typically with careful pH control to favor conjugation while minimizing side reactions.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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