VHL-2

 CAS No.: 1631137-31-9  Cat No.: BP-200035 4.5  

VHL-2 is a high-affinity small-molecule ligand specifically targeting the von Hippel-Lindau (VHL) E3 ubiquitin ligase. As a crucial building block in PROTAC (Proteolysis Targeting Chimeras) drug development, VHL-2 facilitates the recruitment of the VHL E3 ligase, enabling selective ubiquitination and degradation of target proteins. Categorized as an E3 ligase ligand, VHL-2 is extensively used in the synthesis of bifunctional degraders for targeted protein degradation platforms. Its reliable binding properties and chemical stability make it an essential tool for research in cancer, neurodegeneration, and other therapeutic fields leveraging PROTAC technology to achieve selective protein knockdown.

VHL-2

Structure of 1631137-31-9

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Ligand for E3 Ligase
Molecular Formula
C33H41N5O5S
Molecular Weight
619.77

* For research and manufacturing use only. Not for human or clinical use.

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Popular Publications Citing BOC Sciences Products
Sequence
Ac-Phe-Gly(tBu)-Hyp-Unk
IUPACName
(2S,4R)-1-[(2S)-2-[[(2S)-2-acetamido-3-phenylpropanoyl]amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide
Synonyms
N-Acetyl-L-Phenylalanyl-3-Methyl-L-Valyl-(4r)-4-Hydroxy-N-[4-(4-Methyl-1,3-Thiazol-5-Yl)benzyl]-L-Prolinamide
Boiling Point
950.5±65.0 °C at 760 mmHg
Density
1.252±0.06 g/cm3
InChI Key
ALYDGEQICGMVIP-UYIZUTNXSA-N
InChI
InChI=1S/C33H41N5O5S/c1-20-28(44-19-35-20)24-13-11-23(12-14-24)17-34-31(42)27-16-25(40)18-38(27)32(43)29(33(3,4)5)37-30(41)26(36-21(2)39)15-22-9-7-6-8-10-22/h6-14,19,25-27,29,40H,15-18H2,1-5H3,(H,34,42)(H,36,39)(H,37,41)/t25-,26+,27+,29-/m1/s1
Canonical SMILES
CC1=C(SC=N1)C2=CC=C(C=C2)CNC(=O)C3CC(CN3C(=O)C(C(C)(C)C)NC(=O)C(CC4=CC=CC=C4)NC(=O)C)O

Background Introduction

The von Hippel-Lindau (VHL) protein is a substrate recognition subunit of the CUL2-Rbx1 E3 ubiquitin ligase complex and is one of the most widely utilized E3 ligases in PROTAC technology. VHL-based ligands have become the gold standard for recruiting the VHL E3 ligase in protein degradation applications, offering high specificity and reliable performance in targeted protein degradation (TPD) approaches. VHL-2 is a synthetic ligand engineered for optimal binding to the VHL E3 ligase, featuring a functionalized linker chemically suited for PROTAC assembly and versatile conjugation.

Mechanism

VHL-2 functions as a potent and selective ligand for the VHL (von Hippel-Lindau) E3 ubiquitin ligase. By binding to the VHL protein, this small molecule facilitates recruitment of the VHL E3 ligase to desired target proteins when attached via a suitable linker to a ligand specific to the protein of interest. The resulting proximity induces ubiquitination of the target protein, leading to its recognition and subsequent degradation by the cellular proteasome machinery. VHL-2's chemical architecture supports synthetic flexibility, enabling efficient construction of diverse PROTACs.

Applications

VHL-2 is broadly employed in the design and synthesis of VHL-based PROTACs for targeted protein degradation strategies. Key applications include:

• Construction of bifunctional PROTAC molecules using VHL E3 ligase recruitment
• Development of chemical probes for target identification and validation
• Medicinal chemistry and structure-activity relationship (SAR) studies for degrader optimization
• Investigation of cellular pathways reliant on VHL-mediated degradation mechanisms
• Synthesis of tool compounds for academic and pharmaceutical research into protein homeostasis
• High-purity compound verified by HPLC, NMR, and LC-MS
• Consistent batch-to-batch reproducibility with complete QC documentation
• Supplied with COA, MSDS, and analytical data for traceability
• Reliable global shipping with stability-guaranteed packaging
• Dedicated technical support and optional custom synthesis service
• Demonstrates strong binding affinity to CRBN, VHL, or other E3 ligases
• Enables stable E3 ligase recruitment for targeted protein degradation
• High affinity binding to the VHL E3 ligase facilitates efficient ubiquitination of target proteins.
• Optimized linker design enhances PROTAC cell permeability and selectivity, supporting robust degradation assays.
1. Mutational profile and genotype/phenotype correlation of non-familial pheochromocytoma and paraganglioma
Shatha Albattal, Meshael Alswailem, Yosra Moria, Hindi Al-Hindi, Majed Dasouki, Mohamed Abouelhoda, Hala Aba Alkhail, Entissar Alsuhaibani, Ali S Alzahrani Oncotarget. 2019 Oct 15;10(57):5919-5931.doi: 10.18632/oncotarget.27194.
About 30%-40% of patients with pheochromocytoma (PCC) and paraganglioma (PGL) have underlying germline mutations in certain susceptibility genes despite absent family history of these tumors. Here, we present mutational profile of 101 such patients with PCC/PGL (PPGL) from the highly consanguineous population of Saudi Arabia. Results: Of 101 cases with PPGL, 37/101 (36.6%) had germline mutations. Mutations were detected in 30 cases by PCR and direct Sanger sequencing and in 7 additional cases by NGS. The most commonly mutated gene was SDHB (21/101 cases, 20.8%) and the most common SDHB mutation was c.268C>T, p.R90X occurring in 12/21 (57%) cases. Mutations also occurred in SDHC (4/101, 3.96%), SDHD (3/101, 3%), VHL (2/101, 2%) and MAX (2/101, 2%) genes. The following genes were mutated in 1 patient each (1%), RET, SDHA, SDHAF2, TMEM127 and NF1. Metastatic PPGL occurred in 6/21 cases (28.6%) with SDHB mutations and in 1 case with SDHAF2 mutation. Patients and Methods: DNA was isolated from peripheral blood (53 patients) or from non-tumorous formalin fixed paraffin embedded (FFPE) tissue (48 patients). PCR and direct Sanger sequencing of RET, SDHx, VHL, MAX and TMEM127 genes were performed. Cases without mutations were subjected to whole exome sequencing using next generation sequencing (NGS). Conclusion: About 37% of PPGL without family history of such tumors harbor germline mutations. The most commonly mutated gene is SDHB followed by SDHC, SDHD, VHL, MAX and rarely RET, SDHA, SDHAF2, TMEM127 and NF1. SDHB mutations were associated with metastatic PPGL in more than a quarter of cases.
2. VHL-Related Neuroendocrine Neoplasms And Beyond: An Israeli Specialized Center Real-Life Report
Auryan Szalat, Kira Oleinikov, Avital Nahmias, Vardiella Meiner, Simona Ben-Haim, Karine Atlan, Naama Lev-Cohain, Liat Appelbaum, Moshe Gomori, Haggi Mazeh, Abed Khalaileh, Jacob Pe'er, Alexander Lossos, Yigal Shoshan0, Simona Grozinsky-Glasberg, David J Gross Endocr Pract. 2020 Oct;26(10):1131-1142.doi: 10.4158/EP-2020-0220.
Objective:Von Hippel-Lindau (VHL) syndrome is a rare and complex disease. In 1996, we described a 3 generation VHL 2A kindred with 11 mutation carriers. We aim to share our experience regarding the long-term follow-up of this family and the management of all our other VHL patients focusing on frequently encountered neuroendocrine neoplasms: pheochromocytoma/paraganglioma and pancreatic neuroendocrine neoplasms (PNEN). Methods:All VHL patients in follow-up at our tertiary center from 1980 to 2019 were identified. Clinical, laboratory, imaging, and therapeutic characteristics were retrospectively analyzed. Results:We identified 32 VHL patients in 16 different families, 7/16 were classified as VHL 2 subtype. In the previously described family, the 4 initially asymptomatic carriers developed a neuroendocrine tumor; 7 new children were born, 3 of them being mutation carriers; 2 patients died, 1 due to metastatic PNEN-related liver failure. Pheochromocytoma was frequent (22/32), bilateral (13/22;59%), often diagnosed in early childhood when active screening was timely performed, associated with paraganglioma in 5/22, rarely malignant (1/22), and recurred after surgery in some cases after more than 20 years. PNEN occurred in 8/32 patients (25%), and was metastatic in 3 patients. Surgery and palliative therapy allowed relatively satisfactory outcomes. Severe disabling morbidities due to central-nervous system and ophthalmologic hemangiomas, and other rare tumors as chondrosarcoma in 2 patients and polycythemia in 1 patient were observed.Conclusion:A multidisciplinary approach and long-term follow-up is mandatory in VHL patients to manage the multiple debilitating morbidities and delay mortality in these complex patients.
3. Mutations in the VHL tumor suppressor gene and associated lesions in families with von Hippel-Lindau disease from central Europe
D Glavac, H P Neumann, C Wittke, H Jaenig, O Masek, T Streicher, F Pausch, D Engelhardt, K H Plate, H Höfler, F Chen, B Zbar, H Brauch Hum Genet. 1996 Sep;98(3):271-80.doi: 10.1007/s004390050206.
von Hippel-Lindau (VHL) disease is a dominantly inherited familial cancer syndrome predisposing to retinal, cerebellar and spinal hemangioblastoma, renal cell carcinoma (RCC), pheochromocytoma and pancreatic tumors. Clinically two types of the disease can be distinguished: VHL type 1 (without pheochromocytoma) and VHL type 2 (with pheochromocytoma). We report VHL germline mutations and trends in phenotypic variation in families from central Europe. We identified 28 mutations in 53/65 (81.5%) families with 18 (64%) mutations being unique to this population. Whereas types and distribution of mutations as well as a strong correlation of missense mutations with the VHL 2 phenotype were similar to those identified in other populations, these families have provided new insights into the molecular basis for variability in the VHL 2 phenotype. Seven different missense mutations in exons 1 and 3 varied in their biological consequences from a minimal VHL 2 phenotype with pheochromocytoma only to a full VHL 2 phenotype with RCC and pancreatic lesion. These findings contribute to a better understanding of the fundamental mechanisms of VHL disease and its phenotypic variability. Further, we have provided rapid VHL screening for the families in central Europe, which has resulted in improved diagnosis and clinical management.

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It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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