(2S,4R)-1-[(2S)-2-[(1-cyanocyclopropanecarbonyl)amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[(1S)-3-(methylamino)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxopropyl]pyrrolidine-2-carboxamide

 CAS No.: 2316837-42-8  Cat No.: BP-200049 4.5  

(2S,4R)-1-[(2S)-2-[(1-cyanocyclopropanecarbonyl)amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[(1S)-3-(methylamino)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxopropyl]pyrrolidine-2-carboxamide is a high-affinity E3 ligase ligand specifically designed for the development of von Hippel-Lindau (VHL)-based PROTAC degraders. This compound acts as a versatile VHL ligand, binding efficiently to the VHL E3 ubiquitin ligase complex and facilitating the recruitment of targeted proteins for proteasomal degradation. As a core building block for targeted protein degradation studies, this ligand is widely used in the design and synthesis of PROTACs that modulate protein levels in cell biology, oncology, and drug discovery research. The structure supports linker customization, enabling researchers to develop potent and selective protein degraders for a broad range of therapeutic targets.

(2S,4R)-1-[(2S)-2-[(1-cyanocyclopropanecarbonyl)amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[(1S)-3-(methylamino)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxopropyl]pyrrolidine-2-carboxamide

Structure of 2316837-42-8

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Ligand for E3 Ligase
Molecular Formula
C30H38N6O5S
Molecular Weight
594.73

* For research and manufacturing use only. Not for human or clinical use.

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Boiling Point
968.9±65.0 °C at 760 mmHg
Density
1.33±0.1 g/cm3
InChI Key
TXOUIGUFBKWBLO-HXKBJWFLSA-N
InChI
InChI=1S/C30H38N6O5S/c1-17-24(42-16-33-17)19-8-6-18(7-9-19)21(13-23(38)32-5)34-26(39)22-12-20(37)14-36(22)27(40)25(29(2,3)4)35-28(41)30(15-31)10-11-30/h6-9,16,20-22,25,37H,10-14H2,1-5H3,(H,32,38)(H,34,39)(H,35,41)/t20-,21+,22+,25-/m1/s1
Canonical SMILES
CC1=C(SC=N1)C2=CC=C(C=C2)C(CC(=O)NC)NC(=O)C3CC(CN3C(=O)C(C(C)(C)C)NC(=O)C4(CC4)C#N)O

Background Introduction

(2S,4R)-1-[(2S)-2-[(1-cyanocyclopropanecarbonyl)amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[(1S)-3-(methylamino)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxopropyl]pyrrolidine-2-carboxamide is a potent VHL (von Hippel-Lindau) E3 ligase ligand designed for next-generation PROTAC (Proteolysis Targeting Chimera) research. As a synthetic VHL recruiter, this molecule features enhanced binding affinity and selectivity, combined with a robust linker-ready functional group, making it a valuable reagent for targeted protein degradation.

Mechanism

This compound functions by specifically binding to the VHL E3 ubiquitin ligase complex. Once incorporated as an E3 ligase ligand within a heterobifunctional PROTAC molecule, it recruits VHL to the target protein. This proximity facilitates the transfer of ubiquitin from the E2 conjugating enzyme to the substrate, tagging it for rapid degradation by the 26S proteasome. The precise stereochemistry and the cyanocyclopropanecarbonyl moiety ensure strong interaction with the VHL binding pocket, while the hydroxy group allows modular conjugation to a linker or payload.

Applications

(2S,4R)-1-[(2S)-2-[(1-cyanocyclopropanecarbonyl)amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[(1S)-3-(methylamino)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxopropyl]pyrrolidine-2-carboxamide serves as a key building block in the development of VHL-based PROTACs and molecular degraders. Its applications include:

• Construction of PROTAC molecules for TPD (Targeted Protein Degradation) to investigate and drug challenging targets
• Synthesis of VHL-recruiting warheads for preclinical & academic research
• Structure-activity relationship (SAR) studies to optimize PROTAC efficacy and selectivity
• Medicinal chemistry campaigns focused on novel degrader design
• Custom synthesis pipelines for biotechnology, pharmaceutical, and CRO partners

With its high VHL recruitment capacity and convenient functionalization handle, this ligand accelerates the design and validation of next-generation targeted protein degraders.

• High-purity compound verified by HPLC, NMR, and LC-MS
• Consistent batch-to-batch reproducibility with complete QC documentation
• Supplied with COA, MSDS, and analytical data for traceability
• Reliable global shipping with stability-guaranteed packaging
• Dedicated technical support and optional custom synthesis service
• Demonstrates strong binding affinity to CRBN, VHL, or other E3 ligases
• Enables stable E3 ligase recruitment for targeted protein degradation
• Optimized for targeting VHL E3 ligase, enabling efficient and selective protein degradation in PROTAC research.
• High purity and superior structural integrity ensure reliable results in drug discovery and development workflows.

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L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

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