Biotin disulfide N-hydroxysuccinimide ester

 CAS No.: 142439-92-7  Cat No.: BP-501043 4.5  

Biotin disulfide N-hydroxysuccinimide ester is a bifunctional linker that combines a biotin handle with a reducible disulfide bond and an N-hydroxysuccinimide (NHS) ester for covalent amide coupling. Structurally, it contains a biotin moiety connected via a disulfide linkage to an NHS-activated carboxyl group, enabling rapid reaction with primary amines on lysine residues or amine-functionalized small molecules under standard coupling conditions. In PROTAC and targeted degradation workflows, the NHS ester provides a robust conjugation strategy to attach the biotin/disulfide module to one component (e.g., a ligand or scaffold bearing an accessible amine), while the disulfide bond offers a redox-responsive feature that can facilitate intracellular release or reconfiguration of the conjugate after uptake. This product is valuable for building degraders and related probes that require affinity-based detection or enrichment through biotin, combined with a chemically addressable, cleavable linkage for mechanistic studies of degradation and trafficking.

Biotin disulfide N-hydroxysuccinimide ester

Structure of 142439-92-7

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PROTAC Linker
Molecular Formula
C₂₂H₃₃N₅O₇S₃
Molecular Weight
575.72

* For research and manufacturing use only. Not for human or clinical use.

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Please store the product under the recommended conditions in the Certificate of Analysis.
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IUPACName
(2,5-dioxopyrrolidin-1-yl) 3-[[3-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethylamino]-3-oxopropyl]disulfanyl]propanoate
Synonyms
(2-[Biotinamido]ethylamido)-3,3-dithiodipropionic acid N-hydroxysuccinimide ester
InChI Key
LWPHUVGDBNUVHA-GXZWQRSESA-N
InChI
InChI=1S/C22H33N5O7S3/c28-16(4-2-1-3-15-21-14(13-35-15)25-22(33)26-21)23-9-10-24-17(29)7-11-36-37-12-8-20(32)34-27-18(30)5-6-19(27)31/h14-15,21H,1-13H2,(H,23,28)(H,24,29)(H2,25,26,33)/t14-,15-,21-/m0/s1
SMILES
C1CC(=O)N(C1=O)OC(=O)CCSSCCC(=O)NCCNC(=O)CCCCC2C3C(CS2)NC(=O)N3
1. Trafficking of immature DeltaF508-CFTR to the plasma membrane and its detection by biotinylation
Yishan Luo, Ken McDonald, John W Hanrahan Biochem J. 2009 Apr 1;419(1):211-9, 2 p following 219.doi: 10.1042/BJ20081869.
Recent studies suggest that immature, core-glycosylated DeltaF508-CFTR [the predominant mutant form of the CFTR (cystic fibrosis transmembrane conductance regulator)] can reach the plasma membrane under some conditions. In the present study we investigated this possibility since it has implications for understanding how therapeutics rescue the trafficking of mutant CFTR and perhaps other misfolded proteins. Core-glycosylated CFTR was labelled and pulled down on streptavidin beads after exposure to sulfo-NHS-SS-biotin [biotin attached to a reactive NHS (N-hydroxysuccinimide) ester with a disulfide spacer; molecular mass=606.7 Da]; however, intracellular proteins were also detected in the precipitates. When the R domain of CFTR was expressed in the cytosol of BHK (baby-hamster kidney) cells as a soluble polypeptide it was also labelled after surface biotinylation and pulled down on streptavidin beads. Intracellular biotinylation was reduced when cells were treated with sulfo-NHS-LC-biotin (biotin attached to a reactive NHS ester with an aminocaproic acid spacer) or sulfo-NHS-PEO(12)-biotin [biotin attached to a reactive NHS ester with a poly(ethylene glycol) spacer], but the reduction could be explained by the lower reactivity of these reagents. The R domain was detected on Western blots after loading <0.25% of the pulldown sample ( approximately 0.01% of total lysate protein), a fraction that could be ascribed to cells that were permeable to ethidium homodimer-1 (molecular mass=856.8 Da) and propidium iodide (molecular mass=668.6 Da). When BHK cells were incubated at 29 degrees C to rescue DeltaF508-CFTR trafficking, and then biotinylated and sorted to remove permeable cells, labelling of core-glycosylated DeltaF508-CFTR was no longer detected although a weak signal was still observed using CFBE (cystic fibrosis bronchial epithelial) cells. These results suggest that there is weak surface expression of immature DeltaF508-CFTR on airway epithelial cells and demonstrate the need to remove permeable cells when studying CFTR glycoforms by surface biotinylation.
2. Monitoring MHC-II Endocytosis and Recycling Using Cell-Surface Protein Biotinylation-Based Assays
Kyung-Jin Cho, Paul A Roche Methods Mol Biol. 2019;1988:271-277.doi: 10.1007/978-1-4939-9450-2_19.
Most, if not all, plasma membrane proteins continuously undergo endocytosis and many rapidly recycle from endosomes back to the cell surface to maintain "stable" surface expression. We now describe a biochemical assay that is suited to follow the internalization and recycling kinetics of plasma membrane proteins. This assay involves biotinylation of plasma membrane proteins using sulfo-NHS-SS-biotin, a water-soluble, NHS-ester biotinylation reagent that contains a cleavable disulfide bond that allows for reversible labeling of proteins. Biotinylation is rapid and stable, and does not transfer from cell to cell, and the small size of the biotin probe does not affect cell function.
3. The cell-based L-glutathione protection assays to study endocytosis and recycling of plasma membrane proteins
Kristine M Cihil, Agnieszka Swiatecka-Urban J Vis Exp. 2013 Dec 13;(82):e50867.doi: 10.3791/50867.
Membrane trafficking involves transport of proteins from the plasma membrane to the cell interior (i.e. endocytosis) followed by trafficking to lysosomes for degradation or to the plasma membrane for recycling. The cell based L-glutathione protection assays can be used to study endocytosis and recycling of protein receptors, channels, transporters, and adhesion molecules localized at the cell surface. The endocytic assay requires labeling of cell surface proteins with a cell membrane impermeable biotin containing a disulfide bond and the N-hydroxysuccinimide (NHS) ester at 4 ºC - a temperature at which membrane trafficking does not occur. Endocytosis of biotinylated plasma membrane proteins is induced by incubation at 37 ºC. Next, the temperature is decreased again to 4 ºC to stop endocytic trafficking and the disulfide bond in biotin covalently attached to proteins that have remained at the plasma membrane is reduced with L-glutathione. At this point, only proteins that were endocytosed remain protected from L-glutathione and thus remain biotinylated. After cell lysis, biotinylated proteins are isolated with streptavidin agarose, eluted from agarose, and the biotinylated protein of interest is detected by western blotting. During the recycling assay, after biotinylation cells are incubated at 37 °C to load endocytic vesicles with biotinylated proteins and the disulfide bond in biotin covalently attached to proteins remaining at the plasma membrane is reduced with L-glutathione at 4 ºC as in the endocytic assay. Next, cells are incubated again at 37 °C to allow biotinylated proteins from endocytic vesicles to recycle to the plasma membrane. Cells are then incubated at 4 ºC, and the disulfide bond in biotin attached to proteins that recycled to the plasma membranes is reduced with L-glutathione. The biotinylated proteins protected from L-glutathione are those that did not recycle to the plasma membrane.

Biotin disulfide N-hydroxysuccinimide ester is a specialized cleavable linker reagent used to assemble PROTACs and related targeted degradation constructs. It combines a biotin-based handle with a disulfide-containing connectivity and an N-hydroxysuccinimide ester for efficient amide-bond formation. This enables rapid conjugation to primary amines on ligands or protein-binding modules, while the disulfide motif offers a redox-responsive cleavage feature that can facilitate intracellular payload release. The detailed structure and reactivity considerations are provided below.

Structure: The reagent contains an N-hydroxysuccinimide ester functional group for acyl transfer to amines, a biotin moiety for affinity-oriented design, and a disulfide linkage that is chemically distinct from stable carbon–carbon frameworks. It presents multiple heteroatoms (oxygen, nitrogen, sulfur) supporting polarity and reactivity.

Reactivity: The NHS ester is designed for nucleophilic acyl substitution with primary amines under mild, anhydrous-to-semi-aqueous conditions to form stable amide bonds. Typical conjugation workflows use buffering systems compatible with NHS ester stability and include base control to promote amine nucleophilicity while minimizing hydrolysis. No special catalysts are generally required; the key mechanistic principle is formation of an activated acyl intermediate followed by amide coupling. The disulfide segment enables redox-dependent cleavage in appropriate intracellular environments, supporting degradation-linked release strategies.

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It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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