Bis(m-PEG4)-N-OH is a bifunctional m-PEG4 linker bearing two oligo(ethylene glycol) arms terminating in an N-hydroxyl functionality, providing a flexible, hydrophilic spacer for PROTAC assembly. Structurally, it consists of two PEG4 segments connected through a central amine-derived linkage, yielding a “bis-PEG” architecture with an extended effective length and reduced nonspecific hydrophobic interactions. In PROTAC design, such PEG-based linkers help position the two binding elements (typically a target-recruiting ligand and an E3 ligase ligand) at an appropriate distance and orientation to promote productive ternary complex formation. The terminal hydroxyl group enables chemical conjugation to electrophilic handles on partner ligands or to reactive intermediates, supporting modular synthesis. This linker is valuable for optimizing solubility, improving aqueous stability, and tuning linker length in targeted protein degradation experiments, thereby facilitating systematic structure–activity relationship studies.
Structure of 2182601-79-0
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Bis(m-PEG4)-N-OH, is designed to provide a flexible polyethylene glycol (PEG)-based spacer that supports efficient spatial tuning between a target-binding ligand and an E3 ligase-recruiting moiety. Its hydrophilic character and ether-rich backbone can help maintain solubility and reduce non-specific interactions in PROTAC constructs. The molecule will be described in detail below, including its structure and practical reactivity considerations for PROTAC assembly.
Structure: Bis(m-PEG4)-N-OH contains a PEG-derived, ether-rich linker architecture terminated with an N-hydroxyl functionality. The structure features multiple C–O ether bonds and an amide-adjacent N–O motif, providing conformational flexibility, strong hydrogen-bonding capacity, and enhanced aqueous compatibility typical of PEG spacers.
Reactivity: The N-hydroxyl group enables coupling strategies commonly used in PROTAC synthesis, including formation of amide or related linkages via activation of the corresponding carboxylic acid or acyl equivalent. Suitable conditions typically employ standard peptide-coupling chemistries and base-mediated activation in polar aprotic solvents, with temperature control to limit side reactions. Mechanistically, the activated acyl species undergoes nucleophilic substitution/condensation with the hydroxyl-bearing nitrogen functionality to install the linker into the final PROTAC scaffold.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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