4-Boc-amino-2,2-dimethylbutyric acid
4-Boc-amino-2,2-dimethylbutyric acid is a protected, branched amino acid building block featuring a tert-butoxycarbonyl (Boc) carbamate on the α-amino group and a sterically hindered, quaternary carbon–containing side chain. Its structural features provide conformational rigidity and hydrophobic character that can be leveraged to tune the distance, flexibility, and overall physicochemical properties of PROTAC linkers. In targeted protein degradation constructs, such amino acid residues are commonly incorporated into linker regions to modulate the effective reach and relative orientation between the ligand that recruits an E3 ligase and the ligand that binds the target protein, thereby influencing ternary complex formation and degradation potency. As a versatile intermediate for peptide-like or amino-acid–derived linker synthesis, it supports systematic structure–property studies aimed at optimizing solubility, stability, and linker-mediated signaling of productive ubiquitination.
Structure of 153039-17-9
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4-Boc-amino-2,2-dimethylbutyric acid, is designed to serve as a protected amino-acid building block for constructing PROTACs and related targeted protein degradation conjugates. Its amino functionality and carboxylic acid allow modular assembly into ligands and linker architectures, while the Boc protecting group supports controlled, stepwise synthesis. The resulting fragments can be incorporated into amide or related coupling strategies to tune spatial presentation and maintain synthetic flexibility, as will be described in detail below.
Structure: The molecule is an amino acid derivative bearing a tert-butoxycarbonyl (Boc) protected amine and a carboxylic acid, with a branched aliphatic side chain. It contains characteristic amide-forming functional groups, ester/acid-compatible hydrogen-bonding sites, and stable C–C and C–N frameworks suitable for conjugation chemistry.
Reactivity: For PROTAC linker assembly, the Boc group is typically removed under acid-mediated conditions to reveal the free amine, enabling subsequent coupling to activated carboxyl groups on partner fragments. Amide bond formation can be performed using standard peptide coupling approaches (carbodiimide or uronium-type activators) in polar aprotic solvents with bases to promote nucleophilic acyl substitution. Careful control of deprotection and coupling order helps minimize side reactions such as over-activation or racemization.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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