7-Octynoic Acid is a linear, alkyne-bearing fatty acid featuring a terminal propargyl-type functional handle suitable for chemoselective conjugation. Its structural features include a carboxylic acid for amide or ester formation and a carbon–carbon triple bond that can participate in click-type or alkyne-reactive coupling strategies, enabling modular attachment to PROTAC scaffolds or to ligands that require a robust linker. In targeted protein degradation designs, such linkers help position the two binding elements (typically an E3 ligase recruiter and a target-binding moiety) at an appropriate spatial distance and orientation to promote productive ternary complex formation. The alkyne functionality is particularly valuable for iterative synthesis and for introducing defined attachment points without substantially perturbing ligand binding. As a result, 7-Octynoic Acid is a practical building block for constructing and optimizing PROTAC linkers, facilitating structure–activity relationship studies and improving the reproducibility of linker-mediated degradation workflows.
Structure of 10297-09-3
* For research and manufacturing use only. Not for human or clinical use.
| Size | Price | Stock | Quantity |
|---|---|---|---|
| -- | $-- | In stock |
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| ConcentrationVolumeMass | 1 mg | 5 mg | 10 mg |
|---|---|---|---|
| 1 mM | 7.1337 mL | 35.6684 mL | 71.3369 mL |
| 5 mM | 1.4267 mL | 7.1337 mL | 14.2674 mL |
| 10 mM | 0.7134 mL | 3.5668 mL | 7.1337 mL |
7-Octynoic Acid, is a fatty-chain alkyne carboxylic acid designed for modular conjugation in PROTAC architectures. Its terminal alkyne functionality enables widely used bioorthogonal and coupling strategies, while the carboxylic acid supports stable amide or ester formation for controlled linker presentation. These features make it a practical building block for assembling targeted protein degraders, with the detailed structural and synthetic considerations provided below.
Structure: 7-Octynoic Acid is a medium-length aliphatic chain bearing a carboxylic acid and an internal alkyne. It contains a terminally reactive carbon–carbon triple bond alongside an acid group, with predominant single-bond connectivity that confers conformational flexibility. The molecule is typically handled as an organic acid with characteristic hydrogen-bonding and polarity.
Reactivity: The carboxylic acid readily participates in standard PROTAC linker coupling via activation to form amides or esters, commonly using carbodiimide-type coupling systems and base in polar aprotic solvents. The alkyne enables click-type conjugations and related alkyne functionalization under conditions compatible with biomolecule conjugates. Mechanistically, coupling proceeds through an activated ester intermediate, while alkyne-based transformations proceed via addition or cycloaddition pathways, often requiring copper catalysts for classic click chemistry.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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