Pomalidomide-PEG4-CO2H

 CAS No.: 2138440-81-8  Cat No.: BP-100021  Purity: ≥98%  MS  HNMR 4.5  

Pomalidomide-PEG4-CO2H is a specialized E3 Ligase Ligand-Linker Conjugate widely utilized in PROTAC (Proteolysis Targeting Chimera) drug discovery and development. This compound consists of pomalidomide, a potent cereblon (CRBN) E3 ligase ligand, linked via a tetraethylene glycol (PEG4) spacer to a carboxylic acid (CO2H) functional group, enabling efficient conjugation with a variety of target protein ligands. As a key building block in PROTAC synthesis, Pomalidomide-PEG4-CO2H facilitates the recruitment of CRBN to specific target proteins, promoting their ubiquitination and subsequent proteasomal degradation. Ideal for medicinal chemistry research, target validation, and the development of next-generation targeted protein degradation therapies, this reagent is essential for researchers exploring molecular glue and PROTAC-based drug design approaches.

Pomalidomide-PEG4-CO2H

Structure of 2138440-81-8

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Category
E3 Ligase Ligand-Linker Conjugate
Molecular Formula
C24H31N3O10
Molecular Weight
521.52
Appearance
Yellow Gum

* For research and manufacturing use only. Not for human or clinical use.

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Purity
≥98%
Appearance
Yellow Gum
ShelfLife
2 years
Storage
Store at 2-8°C
IUPACName
3-[2-[2-[2-[2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid
Synonyms
Thalidomide-NH-PEG4-COOH; Pomalidomide-PEG4-C2-acid; Pomalidomide-PEG4-COOH; Pomalidomide 4'-PEG4-acid; Pomalidomide-PEG4-C2-COOH; 1-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-3,6,9,12-tetraoxapentadecan-15-oic acid; Pomalidomide-PEG4-Acid; 1-{[2-(2,6-Dioxo-3-piperidinyl)-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl]amino}-3,6,9,12-tetraoxapentadecan-15-oic acid; 3,6,9,12-Tetraoxapentadecan-15-oic acid, 1-[[2-(2,6-dioxo-3-piperidinyl)-2,3-dihydro-1,3-dioxo-1H-isoindol-4-yl]amino]-
Boiling Point
773.6±60.0°C at 760 mmHg
Density
1.4±0.1 g/cm3
InChI Key
CAANPUBZFFRWQP-UHFFFAOYSA-N
InChI
InChI=1S/C24H31N3O10/c28-19-5-4-18(22(31)26-19)27-23(32)16-2-1-3-17(21(16)24(27)33)25-7-9-35-11-13-37-15-14-36-12-10-34-8-6-20(29)30/h1-3,18,25H,4-15H2,(H,29,30)(H,26,28,31)
Canonical SMILES
C1CC(=O)NC(=O)C1N2C(=O)C3=C(C2=O)C(=CC=C3)NCCOCCOCCOCCOCCC(=O)O

Background Introduction

Pomalidomide-PEG4-CO2H is a versatile E3 ligase ligand-linker conjugate commonly used in the design and synthesis of PROTACs (Proteolysis Targeting Chimeras) for targeted protein degradation. This molecule combines the cereblon (CRBN) ligand pomalidomide with a polyethylene glycol (PEG4) linker terminating in a carboxylic acid (CO2H) group. The flexible PEG4 spacer enhances aqueous solubility and provides optimal distance for efficient recruitment of target and E3 ligase complexes.

Mechanism

The mechanism of Pomalidomide-PEG4-CO2H lies in its function as a modular chemical handle for the assembly of heterobifunctional small molecules. Pomalidomide binds and recruits the E3 ubiquitin ligase cereblon (CRBN). The PEG4 linker acts as a flexible bridge, terminating in a reactive carboxylic acid that facilitates further chemical conjugation to target protein ligands via amide bond formation. When incorporated into a PROTAC molecule, the CRBN ligand and the target protein ligand are brought into proximity, promoting ubiquitination and subsequent proteasomal degradation of the target protein.

Applications

Pomalidomide-PEG4-CO2H is widely used in the synthesis of novel PROTAC molecules for chemical biology and drug discovery research. It enables researchers to link various target-binding ligands to the CRBN E3 ligase to develop custom protein degraders for oncology, neurodegeneration, immunology, and other therapeutic areas. This conjugate is also valuable for the structure-activity relationship (SAR) studies of linker length, flexibility, and polarity on PROTAC efficacy, making it a crucial tool in the optimization of next-generation targeted degradation therapeutics.

• PEG4 linker increases solubility and bioavailability for efficient PROTAC design.
• Carboxylic acid terminal enables versatile conjugation to diverse target ligands or warheads.

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L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

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