Pomalidomide-PEG4-CO2H is a specialized E3 Ligase Ligand-Linker Conjugate widely utilized in PROTAC (Proteolysis Targeting Chimera) drug discovery and development. This compound consists of pomalidomide, a potent cereblon (CRBN) E3 ligase ligand, linked via a tetraethylene glycol (PEG4) spacer to a carboxylic acid (CO2H) functional group, enabling efficient conjugation with a variety of target protein ligands. As a key building block in PROTAC synthesis, Pomalidomide-PEG4-CO2H facilitates the recruitment of CRBN to specific target proteins, promoting their ubiquitination and subsequent proteasomal degradation. Ideal for medicinal chemistry research, target validation, and the development of next-generation targeted protein degradation therapies, this reagent is essential for researchers exploring molecular glue and PROTAC-based drug design approaches.
Structure of 2138440-81-8
* For research and manufacturing use only. Not for human or clinical use.
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Background Introduction
Pomalidomide-PEG4-CO2H is a versatile E3 ligase ligand-linker conjugate commonly used in the design and synthesis of PROTACs (Proteolysis Targeting Chimeras) for targeted protein degradation. This molecule combines the cereblon (CRBN) ligand pomalidomide with a polyethylene glycol (PEG4) linker terminating in a carboxylic acid (CO2H) group. The flexible PEG4 spacer enhances aqueous solubility and provides optimal distance for efficient recruitment of target and E3 ligase complexes.
Mechanism
The mechanism of Pomalidomide-PEG4-CO2H lies in its function as a modular chemical handle for the assembly of heterobifunctional small molecules. Pomalidomide binds and recruits the E3 ubiquitin ligase cereblon (CRBN). The PEG4 linker acts as a flexible bridge, terminating in a reactive carboxylic acid that facilitates further chemical conjugation to target protein ligands via amide bond formation. When incorporated into a PROTAC molecule, the CRBN ligand and the target protein ligand are brought into proximity, promoting ubiquitination and subsequent proteasomal degradation of the target protein.
Applications
Pomalidomide-PEG4-CO2H is widely used in the synthesis of novel PROTAC molecules for chemical biology and drug discovery research. It enables researchers to link various target-binding ligands to the CRBN E3 ligase to develop custom protein degraders for oncology, neurodegeneration, immunology, and other therapeutic areas. This conjugate is also valuable for the structure-activity relationship (SAR) studies of linker length, flexibility, and polarity on PROTAC efficacy, making it a crucial tool in the optimization of next-generation targeted degradation therapeutics.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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