XZ739 - CAS 2365172-19-4

XZ739 is a cereblon-dependent PROTAC BCL-XL (a member of the Bcl-2 family) with a DC50 value of 2.5 nM after 16h treatment in MOLT-4 cells. XZ739 also induces cell death through caspase-mediated apoptosis.

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Molecular Formula
C65H76ClF3N8O12S3
Molecular Weight
1349.99

XZ739

    • Specification
      • Purity
        ≥98%
        Solubility
        Soluble in DMSO (20 mg/mL, 14.81 mM, Need ultrasonic)
        Appearance
        Solid Powder
        Storage
        Store at -20°C, stored under nitrogen
        IUPAC Name
        4-[4-[[2-(4-chlorophenyl)-5,5-dimethylcyclohexen-1-yl]methyl]piperazin-1-yl]-N-[4-[[(2R)-4-[2-[2-[2-[2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]ethoxy]ethoxy]ethoxy]ethyl-methylamino]-1-phenylsulfanylbutan-2-yl]amino]-3-(trifluoromethylsulfonyl)phenyl]sulfonylbenzamide
        Synonyms
        4-(4-((4'-chloro-4,4-dimethyl-3,4,5,6-tetrahydro-[1,1'-biphenyl]-2-yl)methyl)piperazin-1-yl)-N-((4-(((15R)-1-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)-12-methyl-16-(phenylthio)-3,6,9-trioxa-12-azahexadecan-15-yl)amino)-3-((trifluoromethyl)sulfonyl)phenyl)sulfonyl)benzamide; 4-(4-{[2-(4-Chlorophenyl)-5,5-dimethyl-1-cyclohexen-1-yl]methyl}-1-piperazinyl)-N-({4-({(1R)-15-{[2-(2,6-dioxo-3-piperidinyl)-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl]amino}-4-methyl-1-[(phenylsulfanyl)methyl]-7,10,13-trioxa-4-azapentadec-1-yl}amino)-3-[(trifluoromethyl)sulfonyl]phenyl}sulfonyl)benzamide
    • Properties
      • Density
        1.44±0.1 g/cm3 (Predicted)
        InChI Key
        RTASGZOITGGVPZ-YJUSKGKKSA-N
        InChI
        InChI=1S/C65H76ClF3N8O12S3/c1-64(2)26-24-52(44-12-16-47(66)17-13-44)46(41-64)42-75-29-31-76(32-30-75)49-18-14-45(15-19-49)60(79)73-92(85,86)51-20-21-54(57(40-51)91(83,84)65(67,68)69)71-48(43-90-50-8-5-4-6-9-50)25-28-74(3)33-35-88-37-39-89-38-36-87-34-27-70-55-11-7-10-53-59(55)63(82)77(62(53)81)56-22-23-58(78)72-61(56)80/h4-21,40,48,56,70-71H,22-39,41-43H2,1-3H3,(H,73,79)(H,72,78,80)/t48-,56?/m1/s1
        Canonical SMILES
        CC1(CCC(=C(C1)CN2CCN(CC2)C3=CC=C(C=C3)C(=O)NS(=O)(=O)C4=CC(=C(C=C4)NC(CCN(C)CCOCCOCCOCCNC5=CC=CC6=C5C(=O)N(C6=O)C7CCC(=O)NC7=O)CSC8=CC=CC=C8)S(=O)(=O)C(F)(F)F)C9=CC=C(C=C9)Cl)C
    • Reference Reading
      • 1. Strategies to Reduce the On-Target Platelet Toxicity of Bcl-xL Inhibitors: PROTACs, SNIPERs and Prodrug-Based Approaches
        Anne Sophie Voisin-Chiret, Arvind Negi Chembiochem . 2022 Jun 20;23(12):e202100689. doi: 10.1002/cbic.202100689.
        Apoptosis is a highly regulated cellular process. Aberration in apoptosis is a common characteristic of various disorders. Therefore, proteins involved in apoptosis are prime targets in multiple therapies. Bcl-xLis an antiapoptotic protein. Compared to other antiapoptotic proteins, the expression of Bcl-xLis common in solid tumors and, to an extent, in some leukemias and lymphomas. The overexpression of Bcl-xLis also linked to survival and chemoresistance in cancer and senescent cells. Therefore, Bcl-xLis a promising anticancer and senolytic target. Various nanomolar range Bcl-xLinhibitors have been developed. ABT-263 was successfully identified as a Bcl-xL/Bcl-2 dual inhibitor. But it failed in the clinical trial (phase-II) because of its on-target platelet toxicity, which also implies an essential role of Bcl-xLprotein in the survival of human platelets. Classical Bcl-xLinhibitor designs utilize occupancy-driven pharmacology with typical shortcomings (such as dose-dependent off-target and on-target platelet toxicities). Hence, event-driven pharmacology-based approaches, such as proteolysis targeting chimeras (PROTACs) and SNIPERs (specific non-genetic IAP-based protein erasers) have been developed. The development of Bcl-xLbased PROTACs was expected, as 600 E3-ligases are available in humans, while some (such as cereblon (CRBN), von Hippel-Lindau (VHL)) are relatively less expressed in platelets. Therefore, E3 ligase ligand-based Bcl-xLPROTACs (CRBN: XZ424, XZ739; VHL: DT2216, PZ703b, 753b) showed a significant improvement in platelet therapeutic index than their parent molecules (ABT-263: DT2216, PZ703b, 753b, XZ739, PZ15227; A1155463: XZ424). Other than their distinctive pharmacology, PROTACs are molecularly large, which limits their cell permeability and plays a role in improving their cell selectivity. We also discuss prodrug-based approaches, such as antibody-drug conjugates (ABBV-155), phosphate prodrugs (APG-1252), dendrimer conjugate (AZD0466), and glycosylated conjugates (Nav-Gal). Studies of in-vitro, in-vivo, structure-activity relationships, biophysical characterization, and status of preclinical/clinical inhibitors derived from these strategies are also discussed in the review.
        2. Discovery of PROTAC BCL-XL degraders as potent anticancer agents with low on-target platelet toxicity
        Guangrong Zheng, Yaxia Yuan, Peiyi Zhang, Dinesh Thummuri, Sajid Khan, Xingui Liu, Xuan Zhang, Daohong Zhou, Wanyi Hu Eur J Med Chem . 2020 Apr 15;192:112186. doi: 10.1016/j.ejmech.2020.112186.
        Anti-apoptotic protein BCL-XLplays a key role in tumorigenesis and cancer chemotherapy resistance, rendering it an attractive target for cancer treatment. However, BCL-XLinhibitors such as ABT-263 cannot be safely used in the clinic because platelets solely depend on BCL-XLto maintain their viability. To reduce the on-target platelet toxicity associated with the inhibition of BCL-XL, we designed and synthesized PROTAC BCL-XLdegraders that recruit CRBN or VHL E3 ligase because both of these enzymes are poorly expressed in human platelets compared to various cancer cell lines. We confirmed that platelet-toxic BCL-XL/2 dual inhibitor ABT-263 can be converted into platelet-sparing CRBN/VHL-based BCL-XLspecific degraders. A number of BCL-XLdegraders are more potent in killing cancer cells than their parent compound ABT-263. Specifically, XZ739, a CRBN-dependent BCL-XLdegrader, is 20-fold more potent than ABT-263 against MOLT-4 T-ALL cells and has >100-fold selectivity for MOLT-4 cells over human platelets. Our findings further demonstrated the utility of PROTAC technology to achieve tissue selectivity through recruiting differentially expressed E3 ligases.
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