TL13-12

 CAS No.: 2229037-04-9  Cat No.: BP-400081  Purity: ≥98% 4.5  

TL13-12 is an ALK-directed PROTAC formed by linking the ALK inhibitor TAE684 to the cereblon ligand pomalidomide. The TAE684-derived component targets the ALK kinase domain, while the pomalidomide-derived component recruits cereblon; the linker connects these modules to enable ternary-complex formation and target ubiquitination. Public sources describe TL13-12 as a potent ALK-PROTAC degrader and note that it may also promote degradation of additional kinases, making selectivity profiling important in experimental interpretation. Its mechanism combines target engagement with cereblon-mediated ubiquitin transfer and proteasomal degradation of ALK protein. TL13-12 is valuable for studying ALK-dependent signaling, fusion kinase degradation, kinase PROTAC design rules, off-target kinase degradation, and biological differences between catalytic ALK inhibition and removal of the ALK protein scaffold.

TL13-12

Structure of 2229037-04-9

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Category
PROTAC
Molecular Formula
C45H53ClN10O10S
Molecular Weight
961.48
Appearance
Yellow Solid

* For research and manufacturing use only. Not for human or clinical use.

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5 mg $299 In stock

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Popular Publications Citing BOC Sciences Products
Purity
≥98%
Solubility
Soluble in DMSO
Appearance
Yellow Solid
Storage
Store at -20°C
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
N-[2-[2-[2-[4-[4-[[5-chloro-4-(2-propan-2-ylsulfonylanilino)pyrimidin-2-yl]amino]-3-methoxyphenyl]piperazin-1-yl]ethoxy]ethoxy]ethyl]-2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]acetamide
Synonyms
TL 13-12; TL-13-12; Acetamide, N-[2-[2-[2-[4-[4-[[5-chloro-4-[[2-[(1-methylethyl)sulfonyl]phenyl]amino]-2-pyrimidinyl]amino]-3-methoxyphenyl]-1-piperazinyl]ethoxy]ethoxy]ethyl]-2-[[2-(2,6-dioxo-3-piperidinyl)-2,3-dihydro-1,3-dioxo-1H-isoindol-4-yl]amino]-; N-(2-(2-(2-(4-(4-((5-Chloro-4-((2-(isopropylsulfonyl)phenyl)amino)pyrimidin-2-yl)amino)-3-methoxyphenyl)piperazin-1-yl)ethoxy)ethoxy)ethyl)-2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)acetamide
Density
1.4±0.1 g/cm3
InChI Key
WXNUIPVZMJMPNM-UHFFFAOYSA-N
InChI
InChI=1S/C45H53ClN10O10S/c1-28(2)67(62,63)37-10-5-4-8-33(37)50-41-31(46)26-49-45(53-41)51-32-12-11-29(25-36(32)64-3)55-18-16-54(17-19-55)20-22-66-24-23-65-21-15-47-39(58)27-48-34-9-6-7-30-40(34)44(61)56(43(30)60)35-13-14-38(57)52-42(35)59/h4-12,25-26,28,35,48H,13-24,27H2,1-3H3,(H,47,58)(H,52,57,59)(H2,49,50,51,53)
SMILES
COC1=C(C=CC(N2CCN(CC2)CCOCCOCCNC(CNC3=C4C(N(C(C4=CC=C3)=O)C5CCC(NC5=O)=O)=O)=O)=C1)NC6=NC=C(C(NC7=C(S(=O)(C(C)C)=O)C=CC=C7)=N6)Cl
Pub Chem ID
138108740
Mechanism

Target: TL13-12 selectively targets anaplastic lymphoma kinase for PROTAC-mediated degradation.

Binding site: Its ALK inhibitor moiety binds the ATP-competitive catalytic site of ALK.

Mechanism of action: TL13-12 is a cereblon-based ALK degrader composed of an ALK inhibitor connected to the CRBN ligand pomalidomide. By recruiting ALK into proximity with CRL4CRBN, TL13-12 promotes ubiquitination and proteasomal clearance of ALK protein in ALK-dependent cellular models. This degradation mechanism provides a tool for examining ALK protein dependence beyond kinase inhibition alone. TL13-12 is suitable for studying NPM-ALK or EML4-ALK signaling, degradation concentration-response behavior, pathway durability, and comparative effects of removing ALK protein versus inhibiting its catalytic function.

Applications

• PROTAC-Mediated Kinase Degradation: TL13-12 serves as a potent tool for selectively degrading kinases involved in signaling pathways. By facilitating the ubiquitination and subsequent proteasomal degradation of target kinases, this PROTAC enables researchers to dissect complex cellular processes and elucidate kinase-driven disease mechanisms.

• Targeted Oncoprotein Degradation: Utilizing TL13-12 allows for the precise degradation of oncoproteins, providing a strategic approach to investigate cancer biology. This application aids in understanding the role of specific oncoproteins in tumorigenesis and offers insights into potential therapeutic targets for drug-resistant cancers.

• PROTAC-Driven Epigenetic Modulation: TL13-12 is instrumental in the targeted degradation of epigenetic regulators, offering a novel method to study gene expression control. By selectively removing key epigenetic proteins, researchers can explore the dynamic regulation of chromatin structure and its impact on cellular differentiation and development.

• Ubiquitin-Proteasome System Exploration: With TL13-12, researchers can delve into the intricacies of the ubiquitin-proteasome system by observing the degradation of specific substrates. This application enhances the understanding of protein homeostasis mechanisms and their implications in various cellular dysfunctions.

1. Chemically induced degradation of anaplastic lymphoma kinase (ALK).
Powell, C.E., Gao, Y., Tan, L., Donovan, K.A., Nowak, R.P., Loehr, A., Bahcall, M., Fischer, E.S., Jänne, P.A., George, R.E. and Gray, N.S., 2018. Journal of medicinal chemistry, 61(9), pp.4249-4255.
We present the development of the first small molecule degraders that can induce anaplastic lymphoma kinase (ALK) degradation, including in non-small-cell lung cancer (NSCLC), anaplastic large-cell lymphoma (ALCL), and neuroblastoma (NB) cell lines. These degraders were developed through conjugation of known pyrimidine-based ALK inhibitors, TAE684 or LDK378, and the cereblon ligand pomalidomide. We demonstrate that in some cell types degrader potency is compromised by expression of drug transporter ABCB1. In addition, proteomic profiling demonstrated that these compounds also promote the degradation of additional kinases including PTK2 (FAK), Aurora A, FER, and RPS6KA1 (RSK1).
ConcentrationVolumeMass1 mg5 mg10 mg
1 mM1.04 mL5.2 mL10.4 mL
5 mM0.21 mL1.04 mL2.08 mL
10 mM0.1 mL0.52 mL1.04 mL
50 mM0.02 mL0.1 mL0.21 mL

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Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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