O-(2-(2-(2-(Prop-2-yn-1-yloxy)ethoxy)ethoxy)ethoxy)ethyl)hydroxylamine is a functionalized, ether-rich PROTAC linker bearing a terminal hydroxylamine handle and a propargyl (prop-2-yn-1-yl oxy) group. Structurally, it consists of a multi-ethylene glycol–type chain that provides conformational flexibility and aqueous solubility, connected through an O-alkyl linkage to a hydroxylamine moiety, enabling formation of oxime-based conjugates with aldehyde-containing targeting ligands or linkers. The incorporated terminal alkyne allows orthogonal chemical modification via copper-catalyzed azide–alkyne cycloaddition or related click chemistries, facilitating modular assembly of bifunctional degraders. In targeted protein degradation workflows, this dual-reactivity design supports efficient, stepwise coupling of an E3 ligase binder (or other targeting element) to a second component while minimizing steric interference through the extended ether spacer. Its linker architecture is therefore valuable for optimizing degrader geometry, improving synthetic flexibility, and enabling rapid generation of PROTAC analog libraries for structure–activity relationship studies.
Structure of 1807537-27-4
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O-(2-(2-(2-(Prop-2-yn-1-yloxy)ethoxy)ethoxy)ethyl)hydroxylamine, is designed to provide a flexible, polyether-based spacer that supports efficient positioning between a ligand and the degradation-targeting module. Its terminal hydroxylamine functionality enables chemoselective conjugation strategies commonly used in PROTAC assembly, while the propargyl ether motif supports orthogonal click-type functionalization.
Structure: The linker contains an O-alkylated polyether chain with multiple ether linkages, terminating in a hydroxylamine group and a propargyl ether (prop-2-yn-1-yloxy) handle. It features an aliphatic backbone with heteroatom-rich connectivity that promotes solvation and conformational flexibility.
Reactivity: The hydroxylamine can be used for nucleophilic coupling to electrophilic partners under mild, aqueous-compatible conditions, leveraging hydroxylamine’s ability to form stable linkages with activated carbonyl or leaving-group-containing intermediates. The terminal alkyne/propargyl ether is suitable for copper-catalyzed azide–alkyne cycloaddition or related orthogonal alkyne chemistries. Typical setups employ inert atmosphere, appropriate base or buffer, and solvents compatible with both coupling and click steps.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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