Azido-PEG4-hydrazide

 CAS No.: 2170240-96-5  Cat No.: BP-500091  Purity: >95% 4.5  

Azido-PEG4-hydrazide is a heterobifunctional polyethylene glycol linker that combines a terminal azide handle with a hydrazide reactive group, separated by a short PEG4 chain to provide aqueous solubility and conformational flexibility. The azide functionality enables bioorthogonal conjugation via copper-free azide–alkyne cycloaddition (click chemistry) or other azide-compatible coupling strategies, allowing attachment to PROTAC warheads, ligands, or payloads bearing a complementary alkyne or suitable reactive partner. The hydrazide end can form stable hydrazone linkages with aldehyde-bearing components or participate in acyl-hydrazide based coupling workflows, supporting controlled assembly of multi-part degraders. In targeted protein degradation research, this linker is valuable for modular PROTAC construction, facilitating efficient synthesis, purification, and systematic variation of linker geometry to tune ternary complex formation and degradation potency. Its PEG spacer helps reduce nonspecific interactions and can improve the functional presentation of conjugated ligands in aqueous assay conditions.

Azido-PEG4-hydrazide

Structure of 2170240-96-5

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Category
PROTAC Linker
Molecular Formula
C₁₁H₂₃N₅O₅
Molecular Weight
305.33

* For research and manufacturing use only. Not for human or clinical use.

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Purity
>95%
Solubility
In DMSO: 100 mg/mL (327.51 mM; Need ultrasonic)
Storage
-20°C, protect from light; In solvent, -80°C, 6 months; -20°C, 1 month (protect from light)
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
3-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethoxy]propanehydrazide
Synonyms
Azido-PEG4-hydrazide HCl Salt;N3-PEG4-Hydrazide
InChI Key
BUAWGAVOHIVJRC-UHFFFAOYSA-N
InChI
InChI=1S/C11H23N5O5/c12-15-11(17)1-3-18-5-7-20-9-10-21-8-6-19-4-2-14-16-13/h1-10,12H2,(H,15,17)
SMILES
C(COCCOCCOCCOCCN=[N+]=[N-])C(=O)NN
ConcentrationVolumeMass1 mg5 mg10 mg
1 mM3.2751 mL16.3757 mL32.7515 mL
5 mM0.6550 mL3.2751 mL6.5503 mL
10 mM0.3275 mL1.6376 mL3.2751 mL

Azido-PEG4-hydrazide, provides a modular polyethylene glycol spacer terminating in an azide handle and a hydrazide functional group. Its flexible, hydrophilic architecture supports efficient conjugation of targeting ligands and improves linker solubility and accessibility in ternary-complex formation. The azide enables bioorthogonal coupling strategies, while the hydrazide supports stable amide/semicarbazone-type linkage design. Detailed structural and reactivity considerations are provided below.

Structure: Azido-PEG4-hydrazide contains a PEG-based flexible ether backbone, an azide substituent, and a hydrazide moiety. The molecule features ether linkages, carbonyl and N–N bonding within the hydrazide, and a terminal azide group suitable for click-type transformations. Overall polarity and conformational flexibility are characteristic of PEG linkers.

Reactivity: The azide group is well suited for copper-catalyzed azide–alkyne cycloaddition or strain-promoted cycloaddition, enabling attachment to alkyne-bearing PROTAC fragments under mild, orthogonal conditions. The hydrazide can participate in acyl-transfer/condensation chemistry with appropriately activated carbonyl partners to form robust linkages common in linker–ligand assembly. Typical coupling workflows use standard peptide/amide-compatible reagents and polar aprotic or aqueous-organic solvents, with reaction control to preserve sensitive functional groups.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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