Bromo-PEG5-phosphonic acid diethyl ester

 CAS No.: 1446282-41-2  Cat No.: BP-500941 4.5  

Bromo-PEG5-phosphonic acid diethyl ester is a bifunctional PEG-based linker featuring a terminal bromo group and a phosphonate protected as a diethyl ester. The PEG5 chain provides a flexible, hydrophilic spacer that can reduce steric interference between the warhead and the recruiting ligand in PROTAC constructs, while the bromo handle enables chemoselective conjugation through substitution or coupling to introduce the linker onto an electrophilic site of a partner molecule. The phosphonate diethyl ester serves as a chemically addressable phosphoryl group that can be converted to the corresponding free phosphonic acid under appropriate conditions, offering a strong, oxygen-rich functionality for further derivatization or for tuning polarity and metal/ion interactions that may influence ternary complex formation. In targeted protein degradation research, this linker is valuable for building modular PROTACs with improved solubility and controllable spatial arrangement, facilitating systematic structure–activity studies and optimization of degradation efficiency.

Bromo-PEG5-phosphonic acid diethyl ester

Structure of 1446282-41-2

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PROTAC Linker
Molecular Formula
C₁₆H₃₄BrO₈P
Molecular Weight
465.31

* For research and manufacturing use only. Not for human or clinical use.

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IUPACName
1-[2-[2-(2-bromoethoxy)ethoxy]ethoxy]-2-[2-(2-diethoxyphosphorylethoxy)ethoxy]ethane
InChI Key
LVKZCSJHVKMWKR-UHFFFAOYSA-N
InChI
InChI=1S/C16H34BrO8P/c1-3-24-26(18,25-4-2)16-15-23-14-13-22-12-11-21-10-9-20-8-7-19-6-5-17/h3-16H2,1-2H3
SMILES
CCOP(=O)(CCOCCOCCOCCOCCOCCBr)OCC

Bromo-PEG5-phosphonic acid diethyl ester is a PEG-based, bromo-functional linker designed to support modular PROTAC assembly by enabling reliable attachment to ligand scaffolds and subsequent coupling strategies. Its ether-rich PEG segment imparts conformational flexibility and aqueous compatibility, while the phosphonate diethyl ester provides a protected handle that can be manipulated under controlled conditions. The bromo terminus supports electrophilic substitution or cross-coupling workflows, facilitating efficient construction of targeted protein degraders. Detailed structure and reactivity guidance are provided below.

Structure: This linker contains a brominated terminus connected to a polyethylene glycol chain, providing ether-rich flexibility. A phosphonate center bearing diethyl ester groups offers a protected, tetrahedral phosphorus motif. The molecule features C–Br, C–O, and P–O ester linkages, contributing to stability and controlled reactivity.

Reactivity: The bromo functionality is suitable for nucleophilic substitution or palladium-catalyzed cross-coupling approaches, depending on the partner nucleophile or coupling partner. The phosphonic acid diethyl ester can be retained during coupling steps and later converted to the corresponding phosphonic acid under standard deprotection conditions. Typical PROTAC linker synthesis uses inert or controlled atmospheres, polar aprotic solvents for coupling, and base/acid conditions selected to preserve ether integrity and avoid unwanted PEG cleavage.

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