mPEG6-amine is a methoxy-terminated poly(ethylene glycol) (PEG) linker bearing a terminal primary amine, providing a short, flexible hydrophilic chain that can be readily functionalized for bioconjugation chemistry. Structurally, it consists of an mPEG segment with a defined low degree of polymerization and an amine handle at the distal end, enabling coupling to activated carboxyl groups (e.g., via amide formation) or to electrophilic intermediates used in PROTAC and related targeted degradation constructs. In PROTAC design, such PEG-amine linkers are commonly employed to tune solubility, reduce nonspecific hydrophobic interactions, and spatially separate functional pharmacophores, thereby improving the accessibility and effective engagement of the E3 ligase-binding moiety and the target-binding ligand. Its value lies in facilitating reproducible linker attachment and in supporting systematic structure–property studies aimed at optimizing degradation potency, cellular uptake, and stability of multicomponent degraders.
Structure of 184357-46-8
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mPEG6-amine is a polyethylene glycol (PEG)-based amine linker designed to support the synthesis of PROTAC architectures by enabling robust conjugation handles and improved physicochemical behavior. Its terminal primary amine facilitates controlled coupling to electrophilic partners, while the PEG segment can enhance solubility and reduce non-specific interactions during PROTAC assembly and evaluation. The detailed structural and reactivity considerations are provided below.
Structure: mPEG6-amine consists of a methoxy-terminated PEG chain bearing a terminal primary amine. The linker features ether linkages along the PEG backbone and a carbon–nitrogen bond at the amine terminus. It is a flexible, hydrophilic, polymeric small molecule with ether-rich, hydrogen-bonding-capable functionality.
Reactivity: The primary amine enables nucleophilic coupling to activated carboxylic acids (for example, via carbodiimide-mediated ester/amide formation) and to activated derivatives such as NHS-esters or other electrophiles used in linker installation. Typical PROTAC synthesis employs polar aprotic solvents and base systems compatible with amine chemistry, with reaction control to minimize side reactions like over-acylation. The mechanism proceeds through amine nucleophilic attack on the activated intermediate, forming stable amide or related linkages.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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