TFC 007 - CAS 927878-49-7

TFC-007 is a selective inhibitor of hematopoietic prostaglandin D synthase (H-PGDS), with high inhibitory activity against the H-PGDS enzyme (IC50 value of 83 nM). TFC-007 can be used to construct a H-PGDS degrader inducer PROTAC(H-PGDS)-1, where TFC-007 binds to H-PGDS and Pomalidomide binds to cereblon.

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Molecular Formula
C27H29N5O4
Molecular Weight
487.55

TFC 007

    • Specification
      • Purity
        ≥98% by HPLC
        Solubility
        Soluble in DMSO
        Storage
        Store at -20°C
        IUPAC Name
        N-[4-[4-(morpholine-4-carbonyl)piperidin-1-yl]phenyl]-2-phenoxypyrimidine-5-carboxamide
        Synonyms
        TFC-007; TFC 007; TFC007; N-[4-[4-(4-Morpholinylcarbonyl)-1-piperidinyl]phenyl]-2-phenoxy-5-pyrimidinecarboxamide
    • Properties
      • InChI Key
        NLSSUSRERAMBTA-UHFFFAOYSA-N
        InChI
        InChI=1S/C27H29N5O4/c33-25(21-18-28-27(29-19-21)36-24-4-2-1-3-5-24)30-22-6-8-23(9-7-22)31-12-10-20(11-13-31)26(34)32-14-16-35-17-15-32/h1-9,18-20H,10-17H2,(H,30,33)
        Canonical SMILES
        C1CN(CCC1C(=O)N2CCOCC2)C3=CC=C(C=C3)NC(=O)C4=CN=C(N=C4)OC5=CC=CC=C5
    • Reference Reading
      • 1. Inhibition of hematopoietic prostaglandin D synthase improves allergic nasal blockage in guinea pigs
        Masanori Fujii, Katsunao Tanaka, Nobuaki Mizutani, Asami Hiromoto, Yusuke Kuriyama, Shigekatsu Kohno, Takeshi Nabe, Saki Shibayama Prostaglandins Other Lipid Mediat . 2011 Aug;95(1-4):27-34. doi: 10.1016/j.prostaglandins.2011.05.001.
        Although it has been suggested that prostaglandin (PG) D(2) is involved in the pathogenesis of allergic rhinitis, whether the inhibition of hematopoietic PGD(2) synthase (H-PGDS) shows beneficial effects on allergic rhinitis has been unclear. We evaluated the effects of a selective H-PGDS inhibitor, TFC-007, on nasal symptoms on Japanese cedar pollen-induced allergic rhinitis of guinea pigs. Sensitized animals were challenged with the pollen once a week. TFC-007 (30mg/kg, p.o.) given once before a challenge almost completely suppressed PGD(2) production in the nasal tissue early and late after the challenge. Although pre-treatment did not affect the incidences of sneezing and early phase nasal blockage, late phase nasal blockage was partially but significantly attenuated; however, nasal eosinophilia was not suppressed. In contrast, when TFC-007 was given once 1.5h after the challenge, the late phase response was not affected. Collectively, PGD(2) produced by H-PGDS early after an antigen challenge can participate in the induction of late phase nasal blockage, although the mechanism may be independent of eosinophil infilatration. The strategy for H-PGDS inhibition may be beneficial for allergic rhinitis therapy.
        2. Development of a Hematopoietic Prostaglandin D Synthase-Degradation Inducer
        Kiyonaga Fujii, Takahito Ito, Mikihiko Naito, Hidetomo Yokoo, Yuki Murakami, Norihito Shibata, Miyako Naganuma, Kosuke Aritake, Yosuke Demizu ACS Med Chem Lett . 2021 Jan 14;12(2):236-241. doi: 10.1021/acsmedchemlett.0c00605.
        Although hematopoietic prostaglandin D synthase (H-PGDS) is an attractive target for treatment of a variety of diseases, including allergic diseases and Duchenne muscular dystrophy, no H-PGDS inhibitors have yet been approved for treatment of these diseases. Therefore, the development of novel agents having other modes of action to modulate the activity of H-PGDS is required. In this study, a chimeric small molecule that degrades H-PGDS via the ubiquitin-proteasome system,PROTAC(H-PGDS)-1, was developed.PROTAC(H-PGDS)-1is composed of two ligands, TFC-007 (that binds to H-PGDS) and pomalidomide (that binds to cereblon).PROTAC(H-PGDS)-1showed potent activity in the degradation of H-PGDS protein via the ubiquitin-proteasome system and in the suppression of prostaglandin D2(PGD2) production. Notably,PROTAC(H-PGDS)-1showed sustained suppression of PGD2production after the drug removal, whereas PGD2production recovered following removal of TFC-007. Thus, the H-PGDS degrader-PROTAC(H-PGDS)-1-is expected to be useful in biological research and clinical therapies.
        3. Discovery of a Highly Potent and Selective Degrader Targeting Hematopoietic Prostaglandin D Synthase via In Silico Design
        Yasushi Saeki, Kiyonaga Fujii, Takahito Ito, Mikihiko Naito, Hidetomo Yokoo, Yuki Murakami, Norihito Shibata, Kengo Hamamura, Akinori Endo, Yuta Yanase, Kosuke Aritake, Yosuke Demizu J Med Chem . 2021 Nov 11;64(21):15868-15882. doi: 10.1021/acs.jmedchem.1c01206.
        Targeted protein degradation by proteolysis-targeting chimera (PROTAC) is one of the exciting modalities for drug discovery and biological discovery. It is important to select an appropriate linker, an E3 ligase ligand, and a target protein ligand in the development; however, it is necessary to synthesize a large number of PROTACs through trial and error. Herein, using a docking simulation of the ternary complex of a hematopoietic prostaglandin D synthase (H-PGDS) degrader, H-PGDS, and cereblon, we have succeeded in developingPROTAC(H-PGDS)-7(6), which showed potent and selective degradation activity (DC50= 17.3 pM) and potent suppression of prostaglandin D2production in KU812 cells. Additionally, in a Duchenne muscular dystrophy model usingmdxmice with cardiac hypertrophy, compound6showed better inhibition of inflammatory cytokines than a potent H-PGDS inhibitor TFC-007. Thus, our results demonstrated that in silico simulation would be useful for the rational development of PROTACs.
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