TFC 007

 CAS No.: 927878-49-7  Cat No.: BP-300198  Purity: ≥98% by HPLC 4.5  

TFC 007 is a selective ligand for hematopoietic prostaglandin D synthase, also known as H-PGDS, and has been used as the target-binding component in H-PGDS degrader construction. The ligand provides molecular recognition of H-PGDS, while its structure can be adapted for connection to a linker and E3 ligase recruiter. In a PROTAC design, the TFC 007 moiety binds H-PGDS, the recruiter engages the degradation machinery, and the linker positions both proteins to support productive ternary complex formation. The intended mechanism is ubiquitin tagging of H-PGDS followed by proteasome-dependent protein depletion, allowing researchers to compare enzyme inhibition with full protein removal. TFC 007 is valuable for studying prostaglandin biosynthesis, H-PGDS protein function, degrader-induced pathway modulation, linker composition effects, ternary complex stability, and target-selective degradation in lipid mediator biology.

TFC 007

Structure of 927878-49-7

Quality
Assurance

Worldwide
Delivery

24/7 Customer
Support
Category
Ligand for Target Protein
Molecular Formula
C27H29N5O4
Molecular Weight
487.55

* For research and manufacturing use only. Not for human or clinical use.

SizePriceStockQuantity
-- $-- In stock

Looking for different specifications? Click to request a custom quote!

Capabilities & Facilities

  • Comprehensive PROTAC Platform
  • Scientific Expertise & Technical Support
  • Custom Synthesis & Design Service
  • Extensive Product Coverage
  • Cutting-Edge Innovation
  • Fast Delivery & Global Support
  • 24/7 customer service
  • 100% quality assurance
Popular Publications Citing BOC Sciences Products
Purity
≥98% by HPLC
Solubility
Soluble in DMSO
Storage
Store at -20°C
IUPACName
N-[4-[4-(morpholine-4-carbonyl)piperidin-1-yl]phenyl]-2-phenoxypyrimidine-5-carboxamide
Synonyms
TFC-007; TFC 007; TFC007; N-[4-[4-(4-Morpholinylcarbonyl)-1-piperidinyl]phenyl]-2-phenoxy-5-pyrimidinecarboxamide
InChI Key
NLSSUSRERAMBTA-UHFFFAOYSA-N
InChI
InChI=1S/C27H29N5O4/c33-25(21-18-28-27(29-19-21)36-24-4-2-1-3-5-24)30-22-6-8-23(9-7-22)31-12-10-20(11-13-31)26(34)32-14-16-35-17-15-32/h1-9,18-20H,10-17H2,(H,30,33)
SMILES
C1CN(CCC1C(=O)N2CCOCC2)C3=CC=C(C=C3)NC(=O)C4=CN=C(N=C4)OC5=CC=CC=C5
Mechanism

Target: TFC-007 targets hematopoietic prostaglandin D synthase, also known as H-PGDS.

Mechanism of Action: TFC-007 is a documented H-PGDS-binding ligand that can be incorporated into H-PGDS degrader design. In a bifunctional PROTAC, the TFC-007 portion binds H-PGDS, while the linker connects it to an E3 ligase ligand such as pomalidomide for CRBN recruitment. The combined molecule is intended to bridge H-PGDS and the E3 ligase in a ternary complex. When the complex is sufficiently stable and correctly oriented, H-PGDS is ubiquitinated and then degraded through the ubiquitin-proteasome system. This establishes a testable protein-depletion mechanism for research assays.

Applications

• PROTAC-Mediated Target Degradation: TFC 007 can be used as a liganding component to build PROTACs that recruit an E3 ligase to a chosen target protein. By tuning linker length and attachment geometry, researchers can optimize ternary complex formation, ubiquitination efficiency, and downstream proteasome-dependent degradation in cell-based assays.

• E3 Ligase Recruitment Optimization: As a PROTAC ligand, TFC 007 supports systematic variation of E3 ligase engagement to map degradation potency drivers. Researchers can compare different linker architectures and conjugation sites to enhance productive ternary complex dwell time, improving degradation selectivity over mere target inhibition.

• Structure–Activity Relationship Studies: TFC 007 is suitable for SAR exploration within targeted protein degradation workflows. By generating analog series and measuring degradation kinetics, investigators can correlate physicochemical changes with cellular target loss, distinguishing compounds that promote rapid ubiquitin-dependent turnover from those that primarily affect stability.

• Mechanism of Action Validation: TFC 007-enabled PROTACs can be used to confirm degradation mechanisms through pathway perturbation. Employing proteasome inhibition, neddylation blockade, and ubiquitination readouts helps establish whether observed target reduction is driven by E3-dependent ubiquitin conjugation and proteasomal processing.

1. Inhibition of hematopoietic prostaglandin D synthase improves allergic nasal blockage in guinea pigs
Masanori Fujii, Katsunao Tanaka, Nobuaki Mizutani, Asami Hiromoto, Yusuke Kuriyama, Shigekatsu Kohno, Takeshi Nabe, Saki Shibayama Prostaglandins Other Lipid Mediat . 2011 Aug;95(1-4):27-34. doi: 10.1016/j.prostaglandins.2011.05.001.
Although it has been suggested that prostaglandin (PG) D(2) is involved in the pathogenesis of allergic rhinitis, whether the inhibition of hematopoietic PGD(2) synthase (H-PGDS) shows beneficial effects on allergic rhinitis has been unclear. We evaluated the effects of a selective H-PGDS inhibitor, TFC-007, on nasal symptoms on Japanese cedar pollen-induced allergic rhinitis of guinea pigs. Sensitized animals were challenged with the pollen once a week. TFC-007 (30mg/kg, p.o.) given once before a challenge almost completely suppressed PGD(2) production in the nasal tissue early and late after the challenge. Although pre-treatment did not affect the incidences of sneezing and early phase nasal blockage, late phase nasal blockage was partially but significantly attenuated; however, nasal eosinophilia was not suppressed. In contrast, when TFC-007 was given once 1.5h after the challenge, the late phase response was not affected. Collectively, PGD(2) produced by H-PGDS early after an antigen challenge can participate in the induction of late phase nasal blockage, although the mechanism may be independent of eosinophil infilatration. The strategy for H-PGDS inhibition may be beneficial for allergic rhinitis therapy.
2. Development of a Hematopoietic Prostaglandin D Synthase-Degradation Inducer
Kiyonaga Fujii, Takahito Ito, Mikihiko Naito, Hidetomo Yokoo, Yuki Murakami, Norihito Shibata, Miyako Naganuma, Kosuke Aritake, Yosuke Demizu ACS Med Chem Lett . 2021 Jan 14;12(2):236-241. doi: 10.1021/acsmedchemlett.0c00605.
Although hematopoietic prostaglandin D synthase (H-PGDS) is an attractive target for treatment of a variety of diseases, including allergic diseases and Duchenne muscular dystrophy, no H-PGDS inhibitors have yet been approved for treatment of these diseases. Therefore, the development of novel agents having other modes of action to modulate the activity of H-PGDS is required. In this study, a chimeric small molecule that degrades H-PGDS via the ubiquitin-proteasome system,PROTAC(H-PGDS)-1, was developed.PROTAC(H-PGDS)-1is composed of two ligands, TFC-007 (that binds to H-PGDS) and pomalidomide (that binds to cereblon).PROTAC(H-PGDS)-1showed potent activity in the degradation of H-PGDS protein via the ubiquitin-proteasome system and in the suppression of prostaglandin D2(PGD2) production. Notably,PROTAC(H-PGDS)-1showed sustained suppression of PGD2production after the drug removal, whereas PGD2production recovered following removal of TFC-007. Thus, the H-PGDS degrader-PROTAC(H-PGDS)-1-is expected to be useful in biological research and clinical therapies.
3. Discovery of a Highly Potent and Selective Degrader Targeting Hematopoietic Prostaglandin D Synthase via In Silico Design
Yasushi Saeki, Kiyonaga Fujii, Takahito Ito, Mikihiko Naito, Hidetomo Yokoo, Yuki Murakami, Norihito Shibata, Kengo Hamamura, Akinori Endo, Yuta Yanase, Kosuke Aritake, Yosuke Demizu J Med Chem . 2021 Nov 11;64(21):15868-15882. doi: 10.1021/acs.jmedchem.1c01206.
Targeted protein degradation by proteolysis-targeting chimera (PROTAC) is one of the exciting modalities for drug discovery and biological discovery. It is important to select an appropriate linker, an E3 ligase ligand, and a target protein ligand in the development; however, it is necessary to synthesize a large number of PROTACs through trial and error. Herein, using a docking simulation of the ternary complex of a hematopoietic prostaglandin D synthase (H-PGDS) degrader, H-PGDS, and cereblon, we have succeeded in developingPROTAC(H-PGDS)-7(6), which showed potent and selective degradation activity (DC50= 17.3 pM) and potent suppression of prostaglandin D2production in KU812 cells. Additionally, in a Duchenne muscular dystrophy model usingmdxmice with cardiac hypertrophy, compound6showed better inhibition of inflammatory cytokines than a potent H-PGDS inhibitor TFC-007. Thus, our results demonstrated that in silico simulation would be useful for the rational development of PROTACs.

TFC-007 is an H-PGDS ligand reported as a target-binding component for an H-PGDS degrader concept using cereblon recruitment. Its morpholine-carbonyl piperidinyl phenyl pyrimidine carboxamide scaffold provides a documented entry point for PROTAC design. This molecule is described in detail below.

Structure: The molecule contains a phenoxy pyrimidine-5-carboxamide core linked to a piperidinyl phenyl group bearing a morpholine-4-carbonyl substituent. This arrangement combines heteroaryl recognition, amide hydrogen bonding, and a polar morpholine amide region.

Reactivity: TFC-007 has explicit reported use in constructing an H-PGDS degradation inducer in which TFC-007 binds H-PGDS and pomalidomide recruits cereblon. For analogous PROTAC construction, the linker should be installed through a SAR-tolerant region of the TFC-007 scaffold, while preserving the pyrimidine carboxamide and phenoxy elements that contribute to target recognition. CRBN ligands such as pomalidomide are directly supported by the reported example, and PEG or alkyl linkers can be varied to tune distance, polarity, and ternary-complex formation; VHL analogues may be explored only as additional experimental designs.

Stock concentration: *
Desired final volume: *
Desired concentration: *

L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

Related Product Recommendations

BOC Sciences Support

Please contact us with any specific requirements and we will get back to you as soon as possible.


  • Verification code

We invite you to contact us at or through our contact form above for more information about our services and products.

USA
  • International:
  • US & Canada (Toll free):
  • Email:
  • Fax:
Germany
Inquiry Basket