DNP-PEG4-NHS ester is a heterobifunctional polyethylene glycol linker bearing a dinitrophenyl (DNP) reactive handle and an N-hydroxysuccinimide (NHS) ester for amide coupling. Structurally, it combines a short PEG4 spacer that provides aqueous solubility and molecular flexibility with an NHS-activated ester that readily reacts with primary amines on proteins, peptides, or lysine-bearing biomolecules to form stable amide bonds. In PROTAC and related targeted degradation constructs, the PEG spacer helps position the recognition/effector elements to favor productive ternary complex formation by reducing steric constraints and improving effective local concentrations. The DNP moiety can serve as a conjugation or binding tag in systems employing anti-DNP recognition, enabling modular assembly of degraders, imaging conjugates, or intermediate bioconjugates. This reagent is valuable for researchers seeking robust, chemoselective labeling strategies and tunable linker geometry to optimize degradation-relevant molecular interactions.
Structure of 858126-78-0
* For research and manufacturing use only. Not for human or clinical use.
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DNP-PEG4-NHS ester, is designed to enable efficient conjugation of targeting ligands via an NHS-activated ester handle while providing a flexible PEG-based spacer that can improve solubility and reduce steric constraints during ternary complex formation. Its electrophilic acylating group supports robust amide-bond formation under standard bioconjugation conditions, making it well suited for constructing degraders where linker length and reactivity control are critical. The detailed structural and reactivity features are described below.
Structure: DNP-PEG4-NHS ester comprises a PEG-based flexible chain terminating in an N-hydroxysuccinimide ester, alongside a DNP aromatic functionality. It contains an activated carboxylate (NHS ester) capable of acyl transfer, ether linkages within the PEG segment, and aromatic and amide-forming carbonyl chemistry.
Reactivity: The NHS ester reacts with primary amines to form stable amide bonds through nucleophilic acyl substitution. Suitable conditions typically use mildly basic aqueous buffers or mixed aqueous-organic media to maintain NHS ester reactivity while preserving ligand integrity. Commonly, no special catalysts are required; careful control of pH and stoichiometry helps minimize hydrolysis. The NHS leaving group facilitates efficient conjugation, and reaction progress is often monitored by analytical methods such as LC-MS or HPLC.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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