TCO-PEG4-acid is a heterobifunctional PEG linker bearing TCO and a carboxylic acid. Structurally, it contains a trans-cyclooctene-derived carbamate connected through a PEG4 spacer to a terminal propionic acid. The TCO functions as a strained dienophile in rapid inverse-electron-demand Diels–Alder ligation with tetrazines, while the carboxylic acid can be activated for amide or ester formation. In PROTAC and related targeted protein degradation research, the reagent supports amine-based installation of one component followed by catalyst-free tetrazine ligation to a second component or reporter. Its defined architecture allows researchers to evaluate how linker polarity, flexibility, attachment sequence, and terminal-group selection influence conjugate preparation and the spatial requirements of productive target–E3 ligase engagement. Clear assignment of the protected and reactive groups also supports reproducible reaction planning and systematic comparison of alternative linker designs in research-focused targeted protein degradation workflows.
Structure of 1802913-21-8
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TCO-PEG4-acid is a bifunctional PROTAC linker designed to connect targeting ligands through a polyethylene glycol spacer while providing a carboxylic acid handle for controlled conjugation. Its PEG-based segment supports favorable solubility and conformational flexibility, which can improve productive ternary complex formation in targeted protein degradation workflows. The following sections describe the linker’s structure and the practical reactivity considerations relevant to PROTAC assembly.
Structure: The linker comprises a terminal carboxylic acid attached to a PEG4 ethylene glycol chain, providing a hydrophilic, flexible spacer. It contains ether linkages within the PEG segment and a terminal acid functionality suitable for amide or ester formation. Overall, it is designed for aqueous compatibility and controlled linker length.
Reactivity: The carboxylic acid group is typically activated for coupling to amine-bearing ligands, commonly via carbodiimide-mediated amide bond formation or related activation chemistries. Reaction conditions are generally selected to preserve sensitive functional groups on the partner ligands and to maintain solubility of both components. Mild bases and polar organic solvents are commonly used to drive coupling while minimizing side reactions, enabling efficient PROTAC construction through stable covalent linkage.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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