Tri-GalNAc-NHS ester

 CAS No.: 1953146-83-2  Cat No.: BP-400159  Purity: >95% 4.5  

Tri-GalNAc-NHS ester is not a conventional intracellular PROTAC but a lysosome-targeting and conjugation building block based on a triantennary N-acetylgalactosamine ligand. Public sources describe it as an asialoglycoprotein receptor ligand that can be coupled through its NHS ester group to antibodies or other amine-containing biomolecules to construct LYTAC-style conjugates. The tri-GalNAc portion binds ASGPR on liver-lineage cells, while the NHS ester provides a reactive handle for covalent conjugation; the resulting conjugate can mediate receptor-dependent endocytosis and lysosomal trafficking of extracellular or membrane-associated targets. Mechanistically, it supports degradation through lysosomal routing rather than ubiquitin-proteasome recruitment. It is useful for hepatic targeting, LYTAC construction, extracellular protein degradation, antibody conjugation, ASGPR-mediated uptake studies, and comparison of lysosome-directed degradation with classical PROTAC-mediated intracellular protein depletion.

Tri-GalNAc-NHS ester

Structure of 1953146-83-2

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Category
PROTAC
Molecular Formula
C79H137N11O37
Molecular Weight
1832.98
Appearance
Solid

* For research and manufacturing use only. Not for human or clinical use.

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Purity
>95%
Appearance
Solid
Storage
Store at -20 °C, under inert atmosphere
IUPACName
(2,5-dioxopyrrolidin-1-yl) 3-[2-[2-[2-[2-[3-[[1,3-bis[3-[3-[5-[(2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoylamino]propylamino]-3-oxopropoxy]-2-[[3-[3-[5-[(2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoylamino]propylamino]-3-oxopropoxy]methyl]propan-2-yl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoate
Synonyms
Tris-GalNAc-b-PEG5-NHS ester; 4,7,10,13,16,23-Hexaoxa-20,27,31-triazahexatriacontanoic acid, 36-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-21,21-bis[[3-[[3-[[5-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-1-oxopentyl]amino]propyl]amino]-3-oxopropoxy]methyl]-19,26,32-trioxo-, 2,5-dioxo-1-pyrrolidinyl ester; 2,5-Dioxo-1-pyrrolidinyl 36-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-21,21-bis[[3-[[3-[[5-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-1-oxopentyl]amino]propyl]amino]-3-oxopropoxy]methyl]-19,26,32-trioxo-4,7,10,13,16,23-hexaoxa-20,27,31-triazahexatriacontanoate
Density
1.37±0.1 g/cm3
InChI Key
JMACKZAHKSDYQD-XSFVKFJNSA-N
InChI
InChI=1S/C79H137N11O37/c1-51(94)86-67-73(110)70(107)54(45-91)124-76(67)121-29-7-4-13-57(97)80-23-10-26-83-60(100)18-33-118-48-79(89-63(103)21-32-113-37-39-115-41-43-117-44-42-116-40-38-114-36-22-66(106)127-90-64(104)16-17-65(90)105,49-119-34-19-61(101)84-27-11-24-81-58(98)14-5-8-30-122-77-68(87-52(2)95)74(111)71(108)55(46-92)125-77)50-120-35-20-62(102)85-28-12-25-82-59(99)15-6-9-31-123-78-69(88-53(3)96)75(112)72(109)56(47-93)126-78/h54-56,67-78,91-93,107-112H,4-50H2,1-3H3,(H,80,97)(H,81,98)(H,82,99)(H,83,100)(H,84,101)(H,85,102)(H,86,94)(H,87,95)(H,88,96)(H,89,103)/t54-,55-,56-,67-,68-,69-,70+,71+,72+,73-,74-,75-,76-,77-,78-/m1/s1
SMILES
CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1OCCCCC(=O)NCCCNC(=O)CCOCC(COCCC(=O)NCCCNC(=O)CCCCO[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)NC(=O)C)(COCCC(=O)NCCCNC(=O)CCCCO[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)NC(=O)C)NC(=O)CCOCCOCCOCCOCCOCCC(=O)ON4C(=O)CCC4=O)CO)O)O
Mechanism

Target: Tri-GalNAc-NHS ester targets hepatocyte ASGPR for liver-directed conjugate uptake.

Binding site: Its triantennary GalNAc motif binds ASGPR carbohydrate-recognition domains.

Mechanism of action: Tri-GalNAc-NHS ester is not a conventional intracellular PROTAC but a high-affinity GalNAc ligand used for hepatocyte-targeted delivery and LYTAC-style conjugate construction. The triantennary N-acetylgalactosamine motif binds the asialoglycoprotein receptor, while the NHS ester reacts with primary amines on antibodies, proteins, or other amine-containing payloads. Resulting conjugates can undergo ASGPR-mediated uptake and lysosomal trafficking, enabling liver-directed clearance or degradation of extracellular proteins. This reagent is useful for studying receptor-mediated delivery, hepatocyte-selective targeting, LYTAC design, and conjugation-dependent degradation workflows.

Applications

• PROTAC Development: Tri-GalNAc-NHS ester can be utilized in the synthesis of PROTAC molecules, facilitating the conjugation of ligands that target specific proteins for degradation. This application is crucial for creating bifunctional molecules that can selectively degrade disease-relevant proteins, advancing the field of targeted protein degradation.

• Targeted Degradation Research: This compound serves as a chemical linker in the design of PROTACs, enabling the study of novel degradation pathways. By allowing precise targeting of proteins, researchers can investigate the mechanistic aspects of protein turnover and its implications in various cellular processes.

• Enhanced Ligand Conjugation: The Tri-GalNAc-NHS ester provides a reactive site for attaching targeting ligands in PROTACs, optimizing the efficiency of protein degradation. This application is essential for refining the specificity and potency of PROTACs, contributing to the development of next-generation therapeutic strategies.

• Protein Interaction Studies: By incorporating Tri-GalNAc-NHS ester in PROTAC constructs, scientists can explore protein-protein interactions and their modulation through targeted degradation. This aids in understanding the dynamic nature of proteomic networks and their role in cellular homeostasis.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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