11-Aminoundecanoic acid is a long-chain aliphatic amino acid linker bearing a terminal amine and a terminal carboxylic acid separated by a hydrophobic alkyl spacer. Its bifunctional structure supports sequential amide coupling or related conjugation strategies, while the lipophilic chain provides a non-PEG spacer option for PROTAC design. This product is suitable for building hydrophobic linker analogues and comparing alkyl spacers with more polar PEG-based linkers. It is valuable for investigating how spacer hydrophobicity, flexibility, and effective distance influence ligand presentation, ternary complex formation, and targeted protein degradation readouts.
Structure of 2432-99-7
* For research and manufacturing use only. Not for human or clinical use.
| Size | Price | Stock | Quantity |
|---|---|---|---|
| 1 kg | $299 | In stock |
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| ConcentrationVolumeMass | 1 mg | 5 mg | 10 mg |
|---|---|---|---|
| 1 mM | 4.9675 mL | 24.8373 mL | 49.6746 mL |
| 5 mM | 0.9935 mL | 4.9675 mL | 9.9349 mL |
| 10 mM | 0.4967 mL | 2.4837 mL | 4.9675 mL |
11-Aminoundecanoic acid, is a long-chain amino acid building block commonly used to connect and spatially tune ligands in targeted protein degradation (PROTAC) constructs. Its flexible aliphatic backbone and terminal functional groups support robust synthetic coupling strategies, enabling control over linker length and conformational freedom to optimize ternary complex formation. The points below describe its structure and practical reactivity considerations in PROTAC assembly.
Structure: 11-Aminoundecanoic acid is a saturated, flexible aliphatic amino acid featuring a primary amine and a carboxylic acid at opposite ends of an eleven-carbon chain. It contains amide-forming functionality and can exist as a zwitterion in aqueous media, with strong hydrogen-bonding capacity.
Reactivity: In PROTAC synthesis, the carboxylic acid is typically converted to an activated derivative (for example, acid chlorides or ester/anhydride intermediates) to enable amide bond formation with complementary amine-bearing partners. Alternatively, the amine can be protected and selectively coupled using standard peptide-coupling chemistries to control chemoselectivity. Mild bases and polar aprotic solvents are commonly used to promote coupling, while reaction conditions are chosen to preserve sensitive functional groups and minimize side reactions such as overactivation or hydrolysis.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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