m-PEG8-ethoxycarbonyl-propanoic acid

 CAS No.: 2353409-75-1  Cat No.: BP-501019 4.5  

m-PEG8-ethoxycarbonyl-propanoic acid is a heterobifunctional PEG-based linker bearing a terminal ethoxycarbonyl-protected carboxylate and a propanoic acid functionality, providing a flexible, hydrophilic spacer typical of PROTAC linker architectures. The PEG chain length and ether oxygen pattern help reduce nonspecific hydrophobic interactions, improve solubility, and can modulate the effective distance and relative orientation between the two binding elements of a PROTAC construct. In targeted protein degradation workflows, this linker can be used to connect a ligand or reactive handle on one component (e.g., an E3 ligase binder) to a complementary functional group on the other component (e.g., a target-binding moiety), enabling formation of a ternary complex through cooperative binding. Its carboxylate-derived reactivity supports controlled conjugation strategies used to generate degraders for mechanistic studies, optimizing linker flexibility and minimizing aggregation to enhance reproducibility in cellular and biochemical assays.

m-PEG8-ethoxycarbonyl-propanoic acid

Structure of 2353409-75-1

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PROTAC Linker
Molecular Formula
C₂₁H₄₀O₁₂
Molecular Weight
484.54

* For research and manufacturing use only. Not for human or clinical use.

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Please store the product under the recommended conditions in the Certificate of Analysis.
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IUPACName
4-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]-4-oxobutanoic acid
InChI Key
PTPATACFPISKEY-UHFFFAOYSA-N
InChI
InChI=1S/C21H40O12/c1-25-4-5-26-6-7-27-8-9-28-10-11-29-12-13-30-14-15-31-16-17-32-18-19-33-21(24)3-2-20(22)23/h2-19H2,1H3,(H,22,23)
SMILES
COCCOCCOCCOCCOCCOCCOCCOCCOC(=O)CCC(=O)O

This m-PEG8-ethoxycarbonyl-propanoic acid linker is designed for constructing PROTACs that require a hydrophilic, flexible spacer between recognition and recruiting modules. Its PEG-based architecture supports improved solubility and conformational adaptability, which can help modulate effective ternary complex formation. The molecule is well suited for research workflows where robust amide coupling and subsequent conjugation steps are needed; the

Structure: The linker contains an m-PEG ether chain providing a flexible, hydrophilic scaffold, and a terminal ethoxycarbonyl-propanoic acid motif. It features ether linkages within the PEG segment and a carboxylic acid functional group suitable for derivatization. Overall, it behaves as a polar, water-compatible spacer.

Reactivity: The carboxylic acid enables standard peptide-coupling chemistries to form amide bonds with amine-bearing PROTAC partners. Typical approaches use carbodiimide-based coupling systems with an activating additive and an appropriate base in polar aprotic solvents, followed by purification. Mechanistically, activation of the acid forms an intermediate that is attacked by the nucleophilic amine to yield the stable linker–conjugate linkage.

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Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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