Methyltetrazine-PEG5-triethoxysilane

 CAS No.: 2353410-01-0  Cat No.: BP-500793  Purity: 98% 4.5  

Methyltetrazine-PEG5-triethoxysilane is a heterobifunctional PROTAC linker designed for modular conjugation and surface or material immobilization. Structurally, it combines a methyltetrazine moiety for rapid, bioorthogonal inverse-electron-demand Diels–Alder reactivity with trans-cyclooctene or related strained dienes, a poly(ethylene glycol) spacer of moderate length to improve solubility and reduce steric interference, and a triethoxysilane group that can hydrolyze and form stable siloxane bonds on silica- or glass-containing substrates. In PROTAC workflows, the tetrazine handle enables efficient coupling of targeting and E3-ligase–recruiting components under mild conditions, while the PEG spacer helps preserve binding interactions and facilitates subsequent assembly or purification. The triethoxysilane functionality further supports immobilized PROTAC constructs for assays, imaging, or controlled presentation on material surfaces, improving experimental throughput and reproducibility in targeted protein degradation research.

Methyltetrazine-PEG5-triethoxysilane

Structure of 2353410-01-0

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Category
PROTAC Linker
Molecular Formula
C₂₉H₄₉N₅O₉Si
Molecular Weight
639.81

* For research and manufacturing use only. Not for human or clinical use.

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Purity
98%
Solubility
DMSO, DCM, DMF
Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
3-[2-[2-[2-[2-[4-(6-methyl-1,2,4,5-tetrazin-3-yl)phenoxy]ethoxy]ethoxy]ethoxy]ethoxy]-N-(3-triethoxysilylpropyl)propanamide
Synonyms
1-[4-(6-methyl-1,2,4,5-tetrazin-3-yl)phenoxy]-N-[3-(triethoxysilyl)propyl]-3,6,9,12-tetraoxapentadecan-15-amide
InChI Key
KTMPHUUZMIOJLF-UHFFFAOYSA-N
InChI
InChI=1S/C29H49N5O9Si/c1-5-41-44(42-6-2,43-7-3)24-8-14-30-28(35)13-15-36-16-17-37-18-19-38-20-21-39-22-23-40-27-11-9-26(10-12-27)29-33-31-25(4)32-34-29/h9-12H,5-8,13-24H2,1-4H3,(H,30,35)
SMILES
CCO[Si](CCCNC(=O)CCOCCOCCOCCOCCOC1=CC=C(C=C1)C2=NN=C(N=N2)C)(OCC)OCC

Methyltetrazine-PEG5-triethoxysilane is a bifunctional PROTAC linker designed to couple a tetrazine-based handle with a silane moiety for robust attachment to silica-containing supports or surfaces. Its PEG spacer supports favorable solubility and spatial reach, while the tetrazine functionality enables bioorthogonal ligation strategies commonly used to assemble targeted degradation constructs. The combination of a reactive tetrazine and hydrolyzable silane offers practical modularity for constructing PROTACs;

Structure: The linker contains a methyltetrazine core connected through a poly(ethylene glycol) spacer to a triethoxysilane group. It features heteroaromatic nitrogen-rich functionality, ether-rich PEG segments, and hydrolyzable Si–O bonds, providing amphiphilic character and surface-reactive silane chemistry.

Reactivity: Triethoxysilane groups typically react via hydrolysis and subsequent condensation to form siloxane networks under mildly aqueous, buffered conditions, often using controlled humidity or pre-hydrolysis steps. The tetrazine handle participates in inverse-electron-demand cycloaddition with strained dienophiles under physiological-compatible aqueous media. For PROTAC assembly, orthogonal sequencing—surface silanization first, then tetrazine ligation—helps maintain functional integrity, with common solvents including aqueous buffer and compatible cosolvents.

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Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
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