SB747651A-PEG3-pomalidomide

 Cat No.: BP-400163 4.5  

SB747651A-PEG3-pomalidomide is a cereblon-recruiting PROTAC candidate linking the kinase inhibitor SB747651A to pomalidomide through a longer PEG spacer. The SB747651A portion is expected to recognize MSK1 and related AGC kinases, while pomalidomide recruits CRL4-cereblon; the PEG linker provides conformational flexibility and spacing that may affect ternary-complex formation. Public supplier information confirms the compound’s PROTAC identity, but accessible sources do not establish a specific validated degradation target or complete ternary-complex binding mode. In research, this molecule is useful for structure–activity comparisons with shorter SB747651A-based linkers, investigation of cereblon-dependent kinase degradation potential, and optimization of degrader physicochemical properties. It should be used with direct degradation, target-engagement, and ligase-dependency assays to define its functional profile.

SB747651A-PEG3-pomalidomide

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PROTAC
Molecular Formula
C37H47N11O8
Molecular Weight
773.85

* For research and manufacturing use only. Not for human or clinical use.

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IUPACName
4-((2-(2-(2-(2-(4-(((2-(4-amino-1,2,5-oxadiazol-3-yl)-1-ethyl-1H-imidazo[4,5-c]pyridin-7-yl)methyl)amino)piperidin-1-yl)ethoxy)ethoxy)ethoxy)ethyl)amino)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione
InChI Key
YBVBACZINZHKBP-UHFFFAOYSA-N
InChI
InChI=1S/C37H47N11O8/c1-2-47-32-23(20-39-22-27(32)42-34(47)31-33(38)45-56-44-31)21-41-24-8-11-46(12-9-24)13-15-54-17-19-55-18-16-53-14-10-40-26-5-3-4-25-30(26)37(52)48(36(25)51)28-6-7-29(49)43-35(28)50/h3-5,20,22,24,28,40-41H,2,6-19,21H2,1H3,(H2,38,45)(H,43,49,50)
SMILES
NC1=NON=C1C(N2CC)=NC3=C2C(CNC4CCN(CCOCCOCCOCCNC5=CC=CC(C(N6C(CC7)C(NC7=O)=O)=O)=C5C6=O)CC4)=CN=C3
Mechanism

Target: SB747651A-PEG3-pomalidomide is designed to recruit MSK1 kinase to cereblon.

Binding site: Its kinase ligand occupies the ATP-competitive binding site of MSK1.

Mechanism of action: SB747651A-PEG3-pomalidomide is a CRBN-recruiting MSK1-directed PROTAC scaffold incorporating SB-747651A, a PEG3 linker, and pomalidomide. The longer PEG3 spacer is designed to alter ternary-complex geometry relative to PEG1 analogs, potentially improving or reducing productive alignment between MSK1 and CRL4CRBN. This molecule is valuable for degrader optimization studies examining linker length, target engagement, cellular permeability, degradation kinetics, and E3-dependent kinase turnover. It should be treated primarily as a research scaffold for evaluating MSK1 degradation feasibility rather than as a broadly validated degrader.

Applications

• PROTAC-Enhanced Drug Discovery: SB747651A-PEG3-pomalidomide facilitates the identification of novel therapeutic targets by enabling the selective degradation of disease-relevant proteins. This approach aids in elucidating protein function and assessing the therapeutic potential of previously undruggable targets, thereby advancing drug discovery efforts in various disease models.

• Targeted Degradation of Oncoproteins: By leveraging SB747651A-PEG3-pomalidomide, researchers can achieve specific degradation of oncogenic proteins, providing insights into cancer biology and potential therapeutic strategies. This targeted approach helps in dissecting the role of oncoproteins in tumorigenesis and validating them as viable targets for cancer treatment.

• Mechanistic Studies in Protein Homeostasis: Utilizing SB747651A-PEG3-pomalidomide allows for detailed mechanistic studies of protein turnover and homeostasis. Researchers can investigate the dynamics of protein degradation pathways, offering valuable data on cellular processes and the role of specific proteins in maintaining cellular health.

• Advancing Neurodegenerative Research: SB747651A-PEG3-pomalidomide aids in the study of neurodegenerative diseases by promoting the degradation of pathogenic proteins implicated in disorders like Alzheimer's and Parkinson's. This targeted degradation strategy provides a powerful tool for understanding disease mechanisms and exploring potential therapeutic interventions.

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L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
g/mol
g

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