Tos-O-C4-NH-Boc is a bifunctional PROTAC linker featuring a tosyl-protected oxygen leaving group coupled through a four-carbon spacer to a Boc-protected amine, enabling controlled stepwise synthesis and subsequent conjugation. The tosylated oxygen functionality can serve as an activation handle for nucleophilic substitution, allowing attachment to nucleophile-bearing warheads or intermediate fragments, while the Boc-protected amine provides a protected site for later coupling under deprotection conditions. In PROTAC design, such linkers are critical for tuning the spatial relationship between the target-binding ligand and the E3-recruiting moiety, thereby influencing productive ternary-complex formation and degradation efficiency. This linker’s defined chain length and orthogonal protecting group strategy make it useful for constructing libraries of PROTACs with systematic linker variation, facilitating optimization of linker geometry and reactivity while maintaining synthetic flexibility for diverse chemotypes in targeted protein degradation research.
Structure of 180851-50-7
* For research and manufacturing use only. Not for human or clinical use.
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Tos-O-C4-NH-Boc, is designed to serve as a chemically addressable intermediate for assembling PROTACs that require controlled connectivity between a ligand and a degradation-targeting module. Its protected amine and tosylate-enabled handle support robust synthetic sequencing and late-stage functionalization. The resulting modularity facilitates systematic optimization of linker length, polarity, and attachment chemistry, enabling researchers to tune ternary complex formation and targeted protein degradation performance. Detailed structural and reactivity considerations are provided below.
Structure: The molecule contains an O-linked tosylate leaving group, a short saturated carbon chain, and a protected carbamate (Boc) on the terminal nitrogen. It features sulfonate ester functionality, ether-like oxygen connectivity, and stable amide/carbamate motifs. Overall, it is a bifunctional linker with orthogonal protection suitable for stepwise coupling.
Reactivity: The tosylate group is typically used for nucleophilic substitution to install a new C–N or C–O connection under standard alkylation conditions, often proceeding via an SN2-type displacement when sterics allow. The Boc-protected amine can be deprotected using commonly employed acid-labile conditions to reveal a nucleophile for subsequent amide or urea bond formation. Suitable solvents include polar aprotic media for substitution and compatible organic solvents for coupling steps, with bases and coupling reagents selected to match the target functional groups.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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