Amino-PEG5-amine

 CAS No.: 72236-26-1  Cat No.: BP-501027  Purity: >97% 4.5  

Amino-PEG5-amine is a bifunctional polyethylene glycol linker featuring terminal primary amine groups separated by a short, flexible PEG chain (approximately five ethylene glycol units). Structurally, its hydrophilic ether backbone imparts conformational mobility and aqueous solubility, while the amine termini enable straightforward conjugation chemistry to PROTAC “warheads” and “recruiters” (e.g., via amide coupling, reductive amination, or other amine-reactive linker strategies). In targeted protein degradation constructs, this type of linker helps tune the effective distance and relative orientation between the ligand-binding elements, thereby facilitating formation of a productive ternary complex and improving the probability of ubiquitination by the recruited E3 ligase. Its PEG-based flexibility can also reduce steric clashes and enhance handling during synthesis and biological testing. Overall, Amino-PEG5-amine is a practical building block for optimizing linker length and physicochemical properties in PROTAC and related conjugate research.

Amino-PEG5-amine

Structure of 72236-26-1

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Category
PROTAC Linker
Molecular Formula
C12H28N2O5
Molecular Weight
280.36
Appearance
Colorless Liquid

* For research and manufacturing use only. Not for human or clinical use.

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Purity
>97%
Appearance
Colorless Liquid
Storage
4°C, protect from light; In solvent, -80°C, 6 months; -20°C, 1 month (protect from light)
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
2-[2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethanamine
Synonyms
2-[2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethanamine; 2-[2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethanamine
Boiling Point
379.915 °C at 760 mmHg
Density
1.055 g/cm<sup>3</sup>
InChI Key
FOOPZYBJIJNBLQ-UHFFFAOYSA-N
InChI
InChI=1S/C12H28N2O5/c13-1-3-15-5-7-17-9-11-19-12-10-18-8-6-16-4-2-14/h1-14H2
SMILES
C(COCCOCCOCCOCCOCCN)N

This amino-terminated polyethylene glycol linker is designed to provide a flexible, hydrophilic spacer for assembling PROTACs that couple an E3 ligase ligand to a target-binding moiety. Its bifunctional amine handles enable robust conjugation strategies while supporting favorable solubility and reduced nonspecific interactions. The linker’s adaptable geometry and chemical compatibility make it suitable for constructing well-defined degraders; detailed structural and synthetic considerations are provided below.

Structure: Amino-PEG5-amine is a bifunctional PEG-based linker featuring terminal primary amines connected through repeating ethylene glycol units. The structure contains ether linkages along the PEG backbone and amine functional groups at both ends, providing a flexible, water-compatible scaffold with hydrogen-bonding capability.

Reactivity: The terminal primary amines can be used for common PROTAC assembly reactions such as amide-bond formation with activated carboxylic acid derivatives, carbamate formation with activated carbonates, or reductive amination with aldehydes/ketones under standard organic conditions. Typical approaches employ coupling reagents or electrophilic activators, with polar aprotic solvents and controlled pH to preserve amine reactivity and maintain linker integrity.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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