Biotin-PEG12-acid

 CAS No.: 1621423-14-0  Cat No.: BP-500848 4.5  

Biotin-PEG12-acid is a heterobifunctional PEG-based linker featuring a terminal biotin moiety connected through a polyethylene glycol chain of twelve ethylene glycol units to a terminal carboxylic acid. The PEG spacer provides high aqueous solubility and flexibility, helping to reduce steric interference between the biotin ligand and the conjugated partner. In PROTAC and targeted degradation workflows, this linker is valuable as a handle for affinity-based capture or immobilization via streptavidin or avidin, enabling controlled assembly, purification, and characterization of biotin-tagged degraders or intermediate conjugates. The terminal carboxyl group allows straightforward coupling to amine- or hydrazide-containing ligands using standard amide or related chemistries, facilitating modular PROTAC construction. This product supports experimental designs that require reproducible attachment, enrichment, and downstream analysis of degradation systems while maintaining favorable biocompatible linker properties for biochemical assays.

Biotin-PEG12-acid

Structure of 1621423-14-0

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PROTAC Linker
Molecular Formula
C₃₇H₆₉N₃O₁₆S
Molecular Weight
844.02

* For research and manufacturing use only. Not for human or clinical use.

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Please store the product under the recommended conditions in the Certificate of Analysis.
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IUPACName
3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid
InChI Key
AEMUKWXFLKZKMD-UEMWQVMZSA-N
InChI
InChI=1S/C37H69N3O16S/c41-34(4-2-1-3-33-36-32(31-57-33)39-37(44)40-36)38-6-8-46-10-12-48-14-16-50-18-20-52-22-24-54-26-28-56-30-29-55-27-25-53-23-21-51-19-17-49-15-13-47-11-9-45-7-5-35(42)43/h32-33,36H,1-31H2,(H,38,41)(H,42,43)(H2,39,40,44)/t32-,33-,36-/m0/s1
SMILES
C1C2C(C(S1)CCCCC(=O)NCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCC(=O)O)NC(=O)N2

Biotin-PEG12-acid is a polyethylene glycol-based linker designed to connect affinity ligands and support efficient targeted protein degradation workflows in PROTAC assemblies. Its PEG-rich scaffold provides conformational flexibility and improved solubility, helping maintain productive ternary complex formation. The terminal carboxylic acid enables reliable conjugation strategies with common PROTAC-relevant warheads or handles.

Structure: The linker comprises a biotin moiety tethered to a long PEG chain terminating in a carboxylic acid. It features ether linkages within the PEG segment and an acid functional group capable of forming amide or ester derivatives. Overall, it is a flexible, hydrophilic scaffold with enhanced aqueous compatibility.

Reactivity: The terminal carboxylic acid supports standard coupling reactions used in PROTAC construction, including amide bond formation with amine-bearing partners via carbodiimide-mediated activation. Typical approaches employ coupling reagents and base in polar organic solvents, followed by purification to remove excess reagents. Mechanistically, activation of the acid promotes nucleophilic acyl substitution by an amine to yield stable conjugates suitable for downstream degradation studies.

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Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

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Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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