Boc-Aminooxy-PEG4 is a protected aminooxy-functional polyethylene glycol linker designed for use in PROTAC and related targeted protein degradation workflows. Structurally, it contains a Boc-protected aminooxy group at one terminus and an ether-rich PEG chain of four repeating units that provides aqueous solubility and conformational flexibility. The aminooxy functionality enables chemoselective oxime ligation or related carbon–nitrogen bond-forming conjugation strategies with aldehyde-bearing partners, allowing researchers to connect a targeting ligand or warhead to a complementary module through a stable oxime linkage. In PROTAC design, this linker architecture helps tune the spatial relationship between the two binding elements, often improving productive ternary complex formation while reducing nonspecific aggregation due to the PEG spacer. As a modular building block, Boc-Aminooxy-PEG4 is valuable for constructing degraders, optimizing linker length and polarity, and systematically evaluating how conjugation geometry influences degradation efficiency in cell-based and biochemical assays.
Structure of 918132-14-6
* For research and manufacturing use only. Not for human or clinical use.
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Boc-Aminooxy-PEG4 is a protected aminooxy-functional polyethylene glycol linker designed for constructing PROTACs and related targeted protein degradation conjugates. Its PEG-based scaffold provides conformational flexibility and improved solubility, supporting efficient ternary complex formation and linker-mediated spatial tuning between ligand modules. The Boc-protection strategy enables controlled downstream functionalization, while the aminooxy handle supports chemoselective oxime ligation workflows.
Structure: The molecule contains a Boc-protected aminooxy group attached to a short, ether-rich PEG chain. It features multiple ether linkages, an aminooxy functional motif, and a carbamate protecting group. The resulting polarity and hydrogen-bonding capacity promote water compatibility and flexible conformational behavior.
Reactivity: For PROTAC assembly, Boc deprotection is typically performed under standard acid-promoted conditions to reveal the free aminooxy functionality. The aminooxy group then engages in oxime formation with aldehyde-bearing partners via nucleophilic addition followed by dehydration. Common approaches use mild aqueous or mixed solvent systems, with pH conditions chosen to favor imine/oxime formation while minimizing side reactions; no metal catalysts are generally required for oxime ligation.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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