Fmoc-N-amido-PEG2-propionic acid is an Fmoc-protected, amide-linked polyethylene glycol (PEG) linker bearing a terminal carboxylic acid, providing a short, flexible hydrophilic spacer for PROTAC and related targeted degradation constructs. The Fmoc group enables solid-phase or amide-coupling compatible synthesis, while the PEG2 segment improves solubility and reduces steric constraints between the two functional modules of a PROTAC, such as the target-binding ligand and the E3 ligase recruiter. The terminal carboxylate allows straightforward conjugation to activated carboxylic acid derivatives or coupling partners, forming stable amide bonds that define the linker’s length and orientation. In targeted protein degradation research, this type of PEG-based, amide-functional linker is valuable for systematically tuning molecular geometry, mitigating aggregation, and supporting reproducible synthesis of degraders for structure–activity relationship studies across different warhead–recruiter pairings.
Structure of 872679-70-4
* For research and manufacturing use only. Not for human or clinical use.
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Fmoc-N-amido-PEG2-propionic acid, provides a PEG-based spacer that can enhance solubility and tune the effective distance and orientation between binding modules in targeted protein degradation constructs. Its Fmoc-protected amide functionality supports controlled stepwise conjugation, enabling reproducible assembly of heterobifunctional degraders. The detailed structural and synthetic considerations below describe how this linker is typically handled and incorporated into PROTAC workflows.
Structure: The molecule contains an Fmoc-protected amide linked to a short PEG spacer and a terminal propionic acid group. It features aromatic carbamate protection, ether-rich poly(ethylene glycol) connectivity, and a carboxylic acid for coupling. Overall, it is a flexible, polar, and hydrogen-bonding capable linker.
Reactivity: The terminal carboxylic acid is suited for amide-bond formation using standard coupling chemistries, typically activated carboxylates with coupling reagents and base in polar aprotic solvents. The Fmoc group is removable under mild base conditions to expose an amine for subsequent conjugation. In PROTAC assembly, this supports sequential coupling strategies that preserve PEG spacer integrity and enable controlled linker installation.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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