m-PEG3-Sulfone-PEG3

 CAS No.: 1919045-00-3  Cat No.: BP-500337 4.5  

m-PEG3-Sulfone-PEG3 is a heterobifunctional PEG-based linker featuring two short, hydrophilic PEG3 segments separated by a sulfone-containing central unit. Structurally, it provides a flexible, water-compatible spacer that can be used to tune the effective distance and relative orientation between a ligand moiety and a recruited E3 ligase or other binding element in a PROTAC construct. The sulfone linkage contributes a polar, conformationally stabilizing core that can influence linker rigidity and hydrolytic/oxidative stability compared with purely aliphatic spacers, while the PEG arms help maintain solubility and reduce nonspecific hydrophobic interactions. In targeted protein degradation research, such PEG–sulfone linkers are valuable for systematically optimizing degradation potency and cooperativity by mitigating steric clashes, improving aqueous handling, and enabling consistent conjugation chemistry for assembling multi-component degraders.

m-PEG3-Sulfone-PEG3

Structure of 1919045-00-3

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PROTAC Linker
Molecular Formula
C₁₃H₂₈O₈S
Molecular Weight
344.42

* For research and manufacturing use only. Not for human or clinical use.

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IUPACName
2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethylsulfonyl]ethoxy]ethoxy]ethanol
InChI Key
JJBPUKMOHCOZFF-UHFFFAOYSA-N
InChI
InChI=1S/C13H28O8S/c1-17-4-5-19-7-9-21-11-13-22(15,16)12-10-20-8-6-18-3-2-14/h14H,2-13H2,1H3
SMILES
COCCOCCOCCS(=O)(=O)CCOCCOCCO

m-PEG3-Sulfone-PEG3 is a PEG-based sulfone-containing PROTAC linker designed to provide a flexible, hydrophilic connection between targeting and E3 ligase-binding modules. Its ether-rich architecture can promote favorable solubility and conformational adaptability, while the sulfone unit offers a chemically robust linkage for assembly strategies commonly used in targeted protein degradation. The detailed structural and reactivity considerations are provided below to support experimental PROTAC construction and optimization.

Structure: The linker comprises polyethylene glycol segments connected through a sulfone-containing linkage, featuring multiple ether oxygen atoms that confer strong polarity and hydrogen-bonding capacity. Its backbone contains stable C–O and S(=O)–C functionalities, supporting flexibility while maintaining chemical integrity under typical organic synthesis conditions.

Reactivity: This sulfone-PEG architecture is generally used as a building block in PROTAC synthesis where functional-group compatibility enables conjugation to ligands. Assembly commonly relies on standard nucleophilic substitution, amide/ester coupling, or reductive/activated group strategies depending on the terminal handles present on the partner molecules. Solvent systems are typically selected to balance PEG solubility and reagent compatibility, while mild bases or coupling reagents are used to preserve ether and sulfone stability during bond formation.

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