Propargyl-PEG2-urea-C3-triethoxysilane is a bifunctional PROTAC linker featuring a terminal propargyl group for copper-free or copper-catalyzed azide–alkyne “click” conjugation, a short polyethylene glycol (PEG2) spacer to enhance aqueous solubility and reduce steric interference, and a urea linkage that provides a stable hydrogen-bonding motif for controlled attachment chemistry. The C3 triethoxysilane end group enables hydrolysis and condensation to form covalently bound siloxane networks on silica- and glass-based surfaces, allowing immobilization of PROTAC constructs or related degraders for surface-assisted studies. In PROTAC design, this architecture supports modular assembly: the propargyl handle can be used to connect targeting ligands or E3-recruiting modules bearing complementary click partners, while the silane handle facilitates reproducible spatial presentation or microenvironment control on solid supports. Such linkers are valuable for studying degradation kinetics, optimizing linker length effects, and enabling immobilized workflows for mechanistic assays and imaging.
Structure of 1637329-79-3
* For research and manufacturing use only. Not for human or clinical use.
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Propargyl-PEG2-urea-C3-triethoxysilane is a multifunctional PROTAC linker designed to integrate orthogonal conjugation handles for efficient assembly of targeted protein degradation constructs. Its PEG-based spacer supports favorable solubility and linker flexibility, while the urea motif enables stable, directional connectivity to targeting ligands. The propargyl group supports click-type coupling, and the triethoxysilane end enables surface or scaffold functionalization. The
Structure: The linker combines a PEG spacer with a urea linkage, providing a hydrogen-bonding motif and conformational flexibility. A terminal propargyl group offers an alkyne for bioorthogonal coupling. The triethoxysilane functionality contains siloxane-forming ethoxy groups and a silicon center, enabling hydrolysis and condensation to siloxane networks.
Reactivity: For PROTAC construction, the terminal alkyne is typically used in copper-catalyzed azide–alkyne cycloaddition or related alkyne-based conjugation strategies under mild aqueous or mixed-solvent conditions. The triethoxysilane end is activated by hydrolysis followed by condensation, forming siloxane bonds on hydroxylated surfaces or silicate scaffolds. Urea-linked intermediates are generally assembled by standard amide/urea-forming chemistries, with reaction control guided by pH and water content to manage silane reactivity.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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