SPDP-PEG4-NHS ester is a heterobifunctional polyethylene glycol linker that combines an NHS ester for amide-bond formation with an SPDP-derived pyridyl disulfide group for thiol-reactive conjugation. Structurally, it features a short PEG4 spacer that provides aqueous solubility and spatial separation between the two reactive termini, helping to reduce steric interference during bioconjugation. In PROTAC design and targeted degradation workflows, this linker is used to connect a thiol-bearing moiety (for example, a cysteine-functionalized ligand or intermediate) to an NHS-activated partner (such as an amine-containing targeting element), while the disulfide functionality enables reversible thiol exchange under reducing conditions. The PEG spacer can improve coupling efficiency and preserve binding of the assembled components. Overall, it is a practical tool for constructing modular, well-defined conjugates for evaluating ternary complex formation and degradation potency in controlled experimental studies.
Structure of 1334177-95-5
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SPDP-PEG4-NHS ester is a PEG-based heterobifunctional linker designed for efficient conjugation in targeted protein degradation workflows. It combines an NHS-activated ester for rapid amide-bond formation with a thiol-reactive disulfide-containing handle, enabling modular assembly of PROTACs from ligands bearing appropriate functional groups. Its PEG spacer supports favorable solubility and spacing effects, improving coupling efficiency and ease of downstream handling.
Structure: The molecule contains a polyethylene glycol spacer terminating in an NHS-activated ester, providing a stable acylating group for nucleophilic attack. A disulfide-bearing functional motif confers thiol-reactivity upon reduction. The linker features ester and ether linkages that contribute to water compatibility and conformational flexibility.
Reactivity: NHS ester conjugation is typically performed under mild, aqueous or mixed-solvent conditions using primary amines as nucleophiles, with pH controlled to favor acyl substitution while minimizing hydrolysis. The disulfide functionality enables thiol-mediated exchange, often after reduction to generate a reactive thiol or via thiol capture depending on the PROTAC assembly strategy. Common coupling solvents include buffered aqueous systems or polar organic mixtures; catalysts are generally not required for NHS acylation, but careful exclusion of competing nucleophiles is recommended.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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