Tri(Amino-PEG4-amide)-amine

 Cat No.: BP-501725 4.5  

Tri(Amino-PEG4-amide)-amine is a branched, tri-functional polyethylene glycol (PEG)-based linker featuring three terminal amine groups connected through PEG4 segments to amide linkages, providing a flexible, hydrophilic scaffold for bioconjugation. In PROTAC construction, such multi-arm linkers are used to spatially organize and tune the effective distance and relative orientation between the two binding modules (e.g., an E3 ligase ligand and a target-binding ligand), while the PEG chains help reduce nonspecific hydrophobic interactions and improve aqueous solubility. The amide-linked PEG arms can be exploited for controlled coupling chemistries to attach payloads or ligands via amide-forming or amine-reactive steps, enabling systematic variation of linker length and branching to modulate ternary complex formation and degradation potency. This linker is therefore valuable for researchers optimizing targeted protein degradation systems, particularly when multivalent or sterically balanced architectures are required to achieve robust cellular activity.

Tri(Amino-PEG4-amide)-amine

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Category
PROTAC Linker
Molecular Formula
C₃₉H₈₁N₇O₁₅
Molecular Weight
888.10

* For research and manufacturing use only. Not for human or clinical use.

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Solubility
In DMSO: 50 mg/mL (56.30 mM; Need ultrasonic)
Storage
Pure form, -20°C, 3 years; 4°C, 2 years; In solvent, -80°C, 6 months; -20°C, 1 month
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
3-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]-N-[2-[bis[2-[3-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]propanoylamino]ethyl]amino]ethyl]propanamide
InChI Key
YGEMWQLDBQAVBU-UHFFFAOYSA-N
InChI
InChI=1S/C39H81N7O15/c40-4-16-53-22-28-59-34-31-56-25-19-50-13-1-37(47)43-7-10-46(11-8-44-38(48)2-14-51-20-26-57-32-35-60-29-23-54-17-5-41)12-9-45-39(49)3-15-52-21-27-58-33-36-61-30-24-55-18-6-42/h1-36,40-42H2,(H,43,47)(H,44,48)(H,45,49)
SMILES
C(COCCOCCOCCOCCN)C(=O)NCCN(CCNC(=O)CCOCCOCCOCCOCCN)CCNC(=O)CCOCCOCCOCCOCCN
ConcentrationVolumeMass1 mg5 mg10 mg
1 mM1.1260 mL5.6300 mL11.2600 mL
5 mM0.2252 mL1.1260 mL2.2520 mL
10 mM0.1126 mL0.5630 mL1.1260 mL

Tri(Amino-PEG4-amide)-amine is a polyethylene glycol (PEG)-based, multi-functional linker designed to support PROTAC assembly by providing flexible spacing and multiple reactive handles for conjugation. Its amide-linked PEG architecture can help tune linker length, solvation, and accessibility of the binding partners, which are critical for efficient ternary complex formation and targeted protein degradation. The points below describe the structure and practical reactivity considerations for constructing PROTACs using this linker.

Structure: The linker comprises a tri-functional amine scaffold substituted with PEG chains terminated by amide linkages, creating a flexible, hydrophilic framework. It contains primary amines and amide bonds, with ether oxygen atoms contributing to strong hydrogen-bonding capacity and water compatibility. This combination supports conformational mobility in bioconjugation workflows.

Reactivity: PROTAC synthesis using this linker typically relies on amine-directed coupling strategies, including amide-bond formation via activated carboxylic acids or carbodiimide-mediated chemistry, and reductive amination when appropriate carbonyl partners are used. Reaction conditions are commonly optimized for aqueous/organic compatibility to preserve PEG solubility and minimize hydrolysis of activated intermediates. Base catalysts and coupling reagents are selected to favor selective attachment while maintaining amine integrity.

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L

* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O √ c22h30n40 ╳
g/mol
g

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