1-Phenyl-2,5,8,11,14,17-hexaoxanonadecan-19-yl 4-methylbenzenesulfonate is a polyethylene glycol–like, highly oxygenated linker bearing a terminal aryl sulfonate leaving group. Structurally, it consists of a long, flexible hexaoxyalkyl chain that provides solvation and conformational adaptability, terminating in a phenyl-substituted anchor and a sulfonate ester that can undergo nucleophilic substitution with appropriate PROTAC warhead or targeting moieties. In PROTAC architectures, such sulfonate-activated linkers are used to install the linker onto amine- or phenol-containing functional groups, enabling covalent conjugation between the ligand that recruits the E3 ubiquitin ligase and the ligand that binds the target protein. The extended, ether-rich chain helps reduce steric clashes and can improve effective reach and linker dynamics, which are critical for productive ternary complex formation. This compound is therefore valuable for constructing modular targeted degradation probes and optimizing linker length and attachment chemistry in structure–activity relationship studies.
Structure of 129086-11-9
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1-Phenyl-2,5,8,11,14,17-hexaoxanonadecan-19-yl 4-methylbenzenesulfonate, is designed to serve as a chemically robust, solubilizing spacer bearing a sulfonate leaving group for controlled conjugation. Its polyether character supports favorable aqueous compatibility and conformational flexibility commonly leveraged in targeted protein degradation constructs. The sulfonate handle enables efficient attachment to nucleophilic partners under standard synthetic conditions, facilitating assembly of bifunctional degraders. Detailed structural and reactivity considerations are provided below.
Structure: The linker comprises a phenyl-anchored, long-chain polyether scaffold containing multiple ether oxygen atoms that impart flexibility and polarity. It terminates in a benzenesulfonate ester, featuring a sulfonyl group bonded to an aromatic ring and an alkoxy leaving group. These features support solubility and stable handling.
Reactivity: The sulfonate ester is suitable for nucleophilic substitution reactions used in PROTAC assembly, where the sulfonate group acts as an activated leaving group. Conjugation is typically performed by reacting the sulfonate with appropriate nucleophiles (such as amines or alcoholates) under conditions that promote SN-type displacement. Common approaches use polar aprotic solvents and base or acid scavenging strategies to drive coupling while minimizing side reactions; catalysts are generally unnecessary for many sulfonate-mediated substitutions.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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