Methyltetrazine-PEG8-acid is a heterobifunctional PEG linker bearing tetrazine and a carboxylic acid. Structurally, it contains a methyl-substituted tetrazine–phenoxy group connected through PEG8 to a terminal propionic acid. The tetrazine acts as an electron-poor diene in rapid IEDDA ligation with TCO or related strained dienophiles, while the carboxylic acid can be activated for amide or ester formation. In PROTAC and related targeted protein degradation research, the reagent supports conventional acid-based installation of one component followed by catalyst-free tetrazine conjugation of a second component or reporter. Its defined architecture allows researchers to evaluate how linker polarity, flexibility, attachment sequence, and terminal-group selection influence conjugate preparation and the spatial requirements of productive target–E3 ligase engagement. Clear assignment of the protected and reactive groups also supports reproducible reaction planning and systematic comparison of alternative linker designs in research-focused targeted protein degradation workflows.
Structure of 2183440-33-5
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Methyltetrazine-PEG8-acid is a PEG-based PROTAC linker designed to enable efficient conjugation chemistry while providing a flexible, hydrophilic spacer for targeted protein degradation workflows. Its methyltetrazine motif supports bioorthogonal coupling strategies that are commonly used to assemble PROTAC constructs under mild conditions. The PEG segment helps modulate solubility and conformational freedom, which can improve the practical handling and assembly of degraders. Detailed structural and reactivity considerations are provided below.
Structure: The linker combines a methyltetrazine functional group with a poly(ethylene glycol) chain terminated by a carboxylic acid. It contains ether linkages within the PEG backbone, an aromatic heterocycle for the tetrazine moiety, and a terminal acidic group capable of hydrogen bonding and salt formation.
Reactivity: Methyltetrazine linkers are typically used in inverse-electron-demand Diels–Alder bioorthogonal reactions with appropriate dienes (commonly strained alkenes such as trans-cyclooctene derivatives) to form stable conjugates. PROTAC assembly is generally performed in aqueous or mixed aqueous/organic buffers at near-physiological pH, using compatible solvents that preserve tetrazine reactivity. No metal catalysts are required for the coupling step, and reaction progress is commonly monitored by analytical methods such as LC–MS.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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