t-boc-N-amido-PEG4-NHS ester
t-Boc-N-amido-PEG4-NHS ester is a polyethylene glycol–based bifunctional linker featuring a terminal N-hydroxysuccinimide (NHS) ester for acylating primary amines and a protected amide functionality (t-Boc) that can be deprotected under standard conditions to reveal a reactive amine for subsequent coupling. The PEG4 segment provides a flexible hydrophilic spacer that improves solubility and reduces steric constraints between conjugated partners, while the NHS ester enables efficient formation of stable amide bonds with lysine residues or engineered amine-bearing groups on target-binding ligands or E3 ligase recruiters used in PROTAC architectures. In targeted protein degradation research, such linkers are valuable for tuning linker length and conformational freedom, thereby optimizing ternary complex formation and degradation potency. Researchers commonly employ this reagent to construct modular PROTAC intermediates, facilitate conjugation workflows, and generate well-defined bioconjugates for systematic structure–activity studies.
Structure of 859230-20-9
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* For research and manufacturing use only. Not for human or clinical use.
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t-boc-N-amido-PEG4-NHS ester, is designed to connect a protein-binding ligand to an E3-ligase recruiting moiety through a flexible polyethylene glycol spacer. Its NHS-ester handle enables efficient, chemoselective conjugation under mild conditions, while the amide/PEG architecture supports favorable solubility and reduced steric constraints in ternary-complex formation. Detailed structural and reactivity considerations are provided below to guide PROTAC assembly and optimization.
Structure: The linker contains a PEG-based hydrophilic spacer, an amide linkage, and a terminal N-hydroxysuccinimide ester. It features stable covalent C–N and C–O bonds, with an acid-labile t-Boc protecting group and an electrophilic carbonyl suitable for nucleophilic acyl substitution. Overall polarity supports aqueous compatibility.
Reactivity: The NHS ester reacts with primary amines to form stable amide bonds via nucleophilic acyl substitution, typically using mildly basic aqueous or mixed solvent conditions that preserve NHS reactivity. Common approaches employ amine-containing ligands or intermediate amine-functionalized handles, with careful control of pH to balance coupling efficiency and hydrolysis. Catalysis is generally unnecessary; solvent choice and timing are critical to minimize NHS ester degradation.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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