mPEG9-NHS ester
mPEG9-NHS ester is an activated methoxy-poly(ethylene glycol) derivative featuring an NHS ester at one terminus, enabling efficient amide-bond formation with primary amines on proteins, peptides, or linker-bearing intermediates. Structurally, it consists of a methoxy-capped PEG chain of approximately nine ethylene glycol units, providing a flexible, hydrophilic spacer that can improve solubility and reduce nonspecific interactions while preserving the reactivity of the NHS group for controlled conjugation. In PROTAC or targeted degradation workflows, this PEG–NHS reagent is used to install a PEG spacer onto ligand scaffolds or protein-binding elements, thereby tuning linker length, conformational freedom, and steric accessibility at the ternary-complex interface. Its utility lies in facilitating reproducible, site-selective functionalization for subsequent assembly of degraders, enabling systematic optimization of degradation potency and selectivity through linker engineering and improved biophysical properties.
Structure of 1316189-13-5
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mPEG9-NHS ester is a polyethylene glycol (mPEG)–functionalized N-hydroxysuccinimide ester designed for efficient conjugation chemistry in PROTAC workflows. Its NHS ester enables rapid coupling to primary amines on ligands, facilitating the modular construction of bifunctional degraders where linker length and hydrophilicity can be tuned to optimize solubility and conjugation efficiency. The structure and reactivity considerations are provided in detail below.
Structure: The product comprises an mPEG chain bearing a terminal N-hydroxysuccinimide ester, providing a stable, water-compatible PEG scaffold. It contains an activated carboxylate functionality (NHS ester) and ether linkages characteristic of PEG, with overall amphiphilic behavior that supports aqueous handling and conjugation.
Reactivity: The NHS ester reacts with primary amines via nucleophilic acyl substitution, forming a stable amide bond while releasing the NHS leaving group. Coupling is typically performed under mildly basic conditions in aqueous or mixed aqueous buffers, often with controlled pH to maintain amine nucleophilicity. Fresh NHS ester solutions, short reaction times, and avoidance of competing nucleophiles (such as excess amines) help drive efficient PROTAC linker installation.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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